RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 TNFAIP8O95379 198 aa11.24□□□□□ -0.61
HDDC2-210ENST00000609574 LSM3P62310 102 aaKnown RBP11.24□□□□□ -0.61
HDDC2-210ENST00000609574 PSG9Q00887 426 aa11.24□□□□□ -0.61
HDDC2-210ENST00000609574 TMEM88Q6PEY1 159 aa11.24□□□□□ -0.61
HDDC2-210ENST00000609574 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
HDDC2-210ENST00000609574 CLUHP3Q96NS8 147 aa11.24□□□□□ -0.61
HDDC2-210ENST00000609574 PBDC1Q9BVG4 233 aa11.24□□□□□ -0.61
HDDC2-210ENST00000609574 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
HDDC2-210ENST00000609574 FABP1P07148 127 aa11.23□□□□□ -0.61
HDDC2-210ENST00000609574 TBPP20226 339 aa11.23□□□□□ -0.61
HDDC2-210ENST00000609574 UCP1P25874 307 aa11.23□□□□□ -0.61
HDDC2-210ENST00000609574 PSMB3P49720 205 aa11.23□□□□□ -0.61
HDDC2-210ENST00000609574 SAMD13Q5VXD3 122 aa11.23□□□□□ -0.61
HDDC2-210ENST00000609574 OR51G1Q8NGK1 321 aa11.23□□□□□ -0.61
HDDC2-210ENST00000609574 PPP1R14BQ96C90 147 aa11.23□□□□□ -0.61
HDDC2-210ENST00000609574 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
HDDC2-210ENST00000609574 TEX13DA0A0J9YY54 714 aaPredicted RBP11.22□□□□□ -0.61
HDDC2-210ENST00000609574 PSG1P11464 419 aa11.22□□□□□ -0.61
HDDC2-210ENST00000609574 SCGB2B2Q4G0G5 96 aa11.22□□□□□ -0.61
HDDC2-210ENST00000609574 TERB2Q8NHR7 220 aa11.22□□□□□ -0.61
HDDC2-210ENST00000609574 RNF125Q96EQ8 232 aa11.22□□□□□ -0.61
HDDC2-210ENST00000609574 C14orf166Q9Y224 244 aaKnown RBP11.22□□□□□ -0.61
HDDC2-210ENST00000609574 FAM25AB3EWG3 89 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 FAM25CB3EWG5 89 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 FAM25GB3EWG6 89 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 TGFBR1P36897 503 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 RORCP51449 518 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 KLF9Q13886 244 aaPredicted RBP11.21□□□□□ -0.61
HDDC2-210ENST00000609574 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 OR8G2PQ6IF36 304 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 MZT2AQ6P582 158 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 C6orf223Q8N319 242 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 ABHD1Q96SE0 405 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 CACNG5Q9UF02 275 aa11.21□□□□□ -0.61
HDDC2-210ENST00000609574 A0A0G2JRQ6 117 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 ZFP92A6NM28 416 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 GABARAPH6UMI1 98 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 GABARAPO95166 117 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 CDS2O95674 445 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 CD3DP04234 171 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 ALDH3B2P48448 385 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 CCL18P55774 89 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 TNP2Q05952 138 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 AARDQ4LEZ3 155 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 RNASE12Q5GAN4 147 aaKnown RBP11.2□□□□□ -0.62
HDDC2-210ENST00000609574 C1orf194Q5T5A4 169 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 LHFPL1Q86WI0 220 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 C15orf40Q8WUR7 153 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 RBPMSQ93062 196 aaKnown RBP11.2□□□□□ -0.62
HDDC2-210ENST00000609574 TMEM222Q9H0R3 208 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 U3KQ87 197 aa11.2□□□□□ -0.62
HDDC2-210ENST00000609574 NBDYA0A0U1RRE5 68 aa11.19□□□□□ -0.62
HDDC2-210ENST00000609574 ISLRO14498 428 aa11.19□□□□□ -0.62
HDDC2-210ENST00000609574 ELK1P19419 428 aa11.19□□□□□ -0.62
HDDC2-210ENST00000609574 FAM78BQ5VT40 261 aa11.19□□□□□ -0.62
HDDC2-210ENST00000609574 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
HDDC2-210ENST00000609574 ZNF709Q8N972 641 aa11.19□□□□□ -0.62
HDDC2-210ENST00000609574 OR13C8Q8NGS7 320 aa11.19□□□□□ -0.62
HDDC2-210ENST00000609574 SLC35B3Q9H1N7 401 aa11.19□□□□□ -0.62
HDDC2-210ENST00000609574 LYRM9A8MSI8 78 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 SNRPGP15A8MWD9 76 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 HPGDSO60760 199 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 NUDT3O95989 172 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 OR5AC1P0C628 307 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 MEOX2P50222 304 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 DEFB1P60022 68 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 B2MP61769 119 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 SUPT4H1P63272 117 aaKnown RBP11.18□□□□□ -0.62
HDDC2-210ENST00000609574 ZNF79Q15937 498 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 MARCH1Q8TCQ1 289 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 SLC35E1Q96K37 410 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 C16orf92Q96LL3 132 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 WDR12Q9GZL7 423 aaKnown RBP11.18□□□□□ -0.62
HDDC2-210ENST00000609574 HSPG2P98160 4391 aa11.18□□□□□ -0.62
HDDC2-210ENST00000609574 F5H768 121 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 RAB3DO95716 219 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 SULT1A3P0DMM9 295 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 SULT1A4P0DMN0 295 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 S100A7P31151 101 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 PAX9P55771 341 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 TAS2R19P59542 299 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 LYZP61626 148 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 CLINT1Q14677 625 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 TMEM268Q5VZI3 342 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 SELENOHQ8IZQ5 122 aaKnown RBP11.17□□□□□ -0.62
HDDC2-210ENST00000609574 C1orf158Q8N1D5 194 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 GPR146Q96CH1 333 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 IGF2BP2-AS1Q96M15 143 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 NAA60Q9H7X0 242 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 KCNIP3Q9Y2W7 256 aa11.17□□□□□ -0.62
HDDC2-210ENST00000609574 A0A0J9YX75 114 aa11.16□□□□□ -0.62
HDDC2-210ENST00000609574 DEFB130BP0DP73 79 aa11.16□□□□□ -0.62
HDDC2-210ENST00000609574 DEFB130AP0DP74 79 aa11.16□□□□□ -0.62
HDDC2-210ENST00000609574 GPX4P36969 197 aaPredicted RBP11.16□□□□□ -0.62
HDDC2-210ENST00000609574 GALR1P47211 349 aa11.16□□□□□ -0.62
HDDC2-210ENST00000609574 ATP5IP56385 69 aaPredicted RBP11.16□□□□□ -0.62
HDDC2-210ENST00000609574 LGI3Q8N145 548 aa11.16□□□□□ -0.62
HDDC2-210ENST00000609574 Q8N1X5 172 aa11.16□□□□□ -0.62
HDDC2-210ENST00000609574 TMEM229BQ8NBD8 167 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms