RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 PROP1O75360 226 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 BRI3O95415 125 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 HRASP01112 189 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 IFNA17P01571 189 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 CSN3P07498 182 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 SYNJ2BPP57105 145 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 CD81P60033 236 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 ARL16Q0P5N6 197 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 TMEM41BQ5BJD5 291 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 CLRN3Q8NCR9 226 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 OR5AN1Q8NGI8 311 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 AIFM2Q9BRQ8 373 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 RSG1Q9BU20 258 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 QTRT1Q9BXR0 403 aaKnown RBP10.09□□□□□ -0.79
CTSA-212ENST00000606394 SLC35B3Q9H1N7 401 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 TMEM140Q9NV12 185 aa10.09□□□□□ -0.79
CTSA-212ENST00000606394 A0A1B0GV50 99 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 FAM74A7A6NL05 159 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 C17orf112F2Z3M2 114 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 FCN1O00602 326 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 IFNA1P01562 189 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 MBP02144 154 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 CT45A6P0DMU7 189 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 CT45A5P0DMU8 189 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 CT45A7P0DMV0 189 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 NPBWR1P48145 328 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 OR2B8PP59922 312 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 RTL8BQ17RB0 113 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 VWC2Q2TAL6 325 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 FAM74A3Q4VXF1 159 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 SPSB3Q6PJ21 355 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 FAM103A1Q9BTL3 118 aaKnown RBP10.08□□□□□ -0.8
CTSA-212ENST00000606394 SCRT1Q9BWW7 348 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 WASHC3Q9Y3C0 194 aa10.08□□□□□ -0.8
CTSA-212ENST00000606394 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 CXorf65A6NEN9 183 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 C15orf61A6NNL5 157 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 C9JQL5 133 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 H0YJW9 148 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 APOA2P02652 100 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 ATF4P18848 351 aaPredicted RBP10.07□□□□□ -0.8
CTSA-212ENST00000606394 FGF7P21781 194 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 POU2AF1Q16633 256 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 ZNF506Q5JVG8 444 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 SSX9Q7RTT3 188 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 PDPNQ86YL7 162 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 SFT2D1Q8WV19 159 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 TMEM68Q96MH6 324 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 ENY2Q9NPA8 101 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 HEYLQ9NQ87 328 aaPredicted RBP10.07□□□□□ -0.8
CTSA-212ENST00000606394 ZNF355PQ9NSJ1 428 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 PEMTQ9UBM1 199 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 PEF1Q9UBV8 284 aaKnown RBP10.07□□□□□ -0.8
CTSA-212ENST00000606394 RFNGQ9Y644 331 aa10.07□□□□□ -0.8
CTSA-212ENST00000606394 PMS2P5A8MQ11 134 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 NUPL2O15504 423 aaKnown RBP10.06□□□□□ -0.8
CTSA-212ENST00000606394 HOXA1P49639 335 aaPredicted RBP10.06□□□□□ -0.8
CTSA-212ENST00000606394 LINC00205P59089 165 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 ZNF709Q8N972 641 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 ZNF383Q8NA42 475 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 GATAD1Q8WUU5 269 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 USMG5Q96IX5 58 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 GGACTQ9BVM4 153 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 SRD5A3Q9H8P0 318 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 SLC35D1Q9NTN3 355 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 PRNDQ9UKY0 176 aa10.06□□□□□ -0.8
CTSA-212ENST00000606394 LOC102723971A0A1B0GUV8 181 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 LOC105371267A0A1B0GV96 52 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 C15orf62A8K5M9 175 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 OR11H12B2RN74 326 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 H7C2Y5 167 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 MPDU1O75352 247 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 CA2P00918 260 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 IFNA10P01566 189 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 ELLP55199 621 aaPredicted RBP10.05□□□□□ -0.8
CTSA-212ENST00000606394 RAB11AP62491 216 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 DLK1P80370 383 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 RHEBQ15382 184 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 RPEL1Q2QD12 228 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 KHDC3LQ587J8 217 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 SPINK9Q5DT21 86 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 OR4A47Q6IF82 309 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 CEMP1Q6PRD7 247 aaPredicted RBP10.05□□□□□ -0.8
CTSA-212ENST00000606394 RPP25LQ8N5L8 163 aaKnown RBP10.05□□□□□ -0.8
CTSA-212ENST00000606394 DEFB125Q8N687 156 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 KCNIP2Q9NS61 270 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 RPRMQ9NS64 109 aa10.05□□□□□ -0.8
CTSA-212ENST00000606394 METTL1Q9UBP6 276 aaKnown RBP10.05□□□□□ -0.8
CTSA-212ENST00000606394 KLK5Q9Y337 293 aaPredicted RBP10.05□□□□□ -0.8
CTSA-212ENST00000606394 MAP1LC3B2A6NCE7 125 aa10.04□□□□□ -0.8
CTSA-212ENST00000606394 ZNF785A8K8V0 405 aa10.04□□□□□ -0.8
CTSA-212ENST00000606394 NDUFB8O95169 186 aa10.04□□□□□ -0.8
CTSA-212ENST00000606394 CCL20P78556 96 aa10.04□□□□□ -0.8
CTSA-212ENST00000606394 ICAM4Q14773 271 aa10.04□□□□□ -0.8
CTSA-212ENST00000606394 FXYD3Q14802 87 aa10.04□□□□□ -0.8
CTSA-212ENST00000606394 PSG5Q15238 335 aa10.04□□□□□ -0.8
CTSA-212ENST00000606394 CD300EQ496F6 205 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms