RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 KLF6Q99612 283 aaPredicted RBP2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 HIST1H2BNQ99877 126 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 HIST1H2BMQ99879 126 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 OR8D2Q9GZM6 311 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 C11orf68Q9H3H3 251 aaKnown RBP2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 ENY2Q9NPA8 101 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 ARMC1Q9NVT9 282 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 NDUFAF1Q9Y375 327 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 UTP11Q9Y3A2 253 aaKnown RBP2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 KMT2EQ8IZD2 1858 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 NAV1Q8NEY1 1877 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 SLX4Q8IY92 1834 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 LOC285556D6RIA3 1793 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 SSC5DA1L4H1 1573 aa2.02□□□□□ -2.09
AC004542.1-201ENST00000602955 MYH13Q9UKX3 1938 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 DICER1Q9UPY3 1922 aaKnown RBP2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 ECM29Q5VYK3 1845 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 A0A0G2JMZ2 1700 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 DPRXA6NFQ7 191 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 PIRO00625 290 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 LGALS1P09382 135 aaKnown RBP2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 PSMB8P28062 276 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 HLA-DMBP28068 263 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 CCR2P41597 374 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 DEFA3P59666 94 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 SS18Q15532 418 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 PABPC1L2AQ5JQF8 200 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 AADACL3Q5VUY0 350 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 AGTRAPQ6RW13 159 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 LYZL1Q6UWQ5 148 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 BRD3OSQ6XYD6 125 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 SLC36A1Q7Z2H8 476 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 SLC35E3Q7Z769 313 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 TMED4Q7Z7H5 227 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 LINC00301Q8NCQ3 95 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 OR5J2Q8NH18 312 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 Q9BRP9 147 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 DERL1Q9BUN8 251 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 CCDC90BQ9GZT6 254 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 OPTCQ9UBM4 332 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 TP73-AS1Q9UF72 201 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 SS18L2Q9UHA2 77 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 SMPXQ9UHP9 88 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 UFC1Q9Y3C8 167 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 CCDC88AQ3V6T2 1871 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 CDK5RAP2Q96SN8 1893 aa2.01□□□□□ -2.09
AC004542.1-201ENST00000602955 TRAV9-1A0A075B6T8 112 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 IGKV1D-43A0A0B4J1Z2 117 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 FABP5P3A8MUU1 101 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 CREBL2O60519 120 aaPredicted RBP2□□□□□ -2.09
AC004542.1-201ENST00000602955 IGHV3-7P01780 117 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 RBP1P09455 135 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 EMP1P54849 157 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 TPI1P60174 286 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 ARHGAP11BQ3KRB8 267 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 RPL22L1Q6P5R6 122 aaKnown RBP2□□□□□ -2.09
AC004542.1-201ENST00000602955 ZNF705AQ6ZN79 300 aaPredicted RBP2□□□□□ -2.09
AC004542.1-201ENST00000602955 DEFB132Q7Z7B7 95 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 OR51T1Q8NGJ9 327 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 OR10K1Q8NGX5 313 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 MRPS24Q96EL2 167 aaKnown RBP2□□□□□ -2.09
AC004542.1-201ENST00000602955 PARVBQ9HBI1 364 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 BATF3Q9NR55 127 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 C19orf12Q9NSK7 152 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 ZNF236Q9UL36 1845 aa2□□□□□ -2.09
AC004542.1-201ENST00000602955 TRAV7A0A075B6U4 112 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 hCG_1818297A0A087WSY0 165 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 A0A1B0GV72 72 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 IRGMA1A4Y4 181 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 GGT3PA6NGU5 568 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 A8MT66 165 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 H3BT86 120 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 IFNA10P01566 189 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 IFNA21P01568 189 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 C8GP07360 202 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 SULT1A3P0DMM9 295 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 SULT1A4P0DMN0 295 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 RPL28P46779 137 aaKnown RBP1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 EVX1P49640 407 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 GNG3P63215 75 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 MEF2BQ02080 365 aaPredicted RBP1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 ZNF90Q03938 601 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 OR11H6Q8NGC7 330 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 OR10J5Q8NHC4 309 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 GNPDA2Q8TDQ7 276 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 H1FXQ92522 213 aaKnown RBP1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 SLC7A6Q92536 515 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 DNAJC30Q96LL9 226 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 FAM107BQ9H098 131 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 NDUFB11Q9NX14 153 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 TIMM9Q9Y5J7 89 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 DSCAMO60469 2012 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 ZNF407Q9C0G0 2248 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 MYH2Q9UKX2 1941 aa1.99□□□□□ -2.09
AC004542.1-201ENST00000602955 IGHV3-64A0A075B6Q5 118 aa1.98□□□□□ -2.09
AC004542.1-201ENST00000602955 TRAV41A0A0B4J266 112 aa1.98□□□□□ -2.09
AC004542.1-201ENST00000602955 SIGLEC16A6NMB1 481 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms