RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.5□□□□□ -0.25
DDX49-213ENST00000602113 PPP5D1E7EU14 171 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 TGOLN2O43493 480 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 TOMM40O96008 361 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 COMMD1Q8N668 190 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 OR4X2Q8NGF9 303 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 GAR1Q9NY12 217 aaKnown RBP13.5□□□□□ -0.25
DDX49-213ENST00000602113 DOK5Q9P104 306 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 NUPL2O15504 423 aaKnown RBP13.5□□□□□ -0.25
DDX49-213ENST00000602113 FABP1P07148 127 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 PXDC1Q5TGL8 231 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 FAM122CQ6P4D5 195 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 PATE2Q6UY27 113 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 TMEM37Q8WXS4 190 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 OR5B12Q96R08 314 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 GNB4Q9HAV0 340 aa13.5□□□□□ -0.25
DDX49-213ENST00000602113 ANKRD34BA5PLL1 514 aa13.49□□□□□ -0.25
DDX49-213ENST00000602113 SEC14L6B5MCN3 397 aa13.49□□□□□ -0.25
DDX49-213ENST00000602113 BLOC1S1P78537 153 aa13.49□□□□□ -0.25
DDX49-213ENST00000602113 SLC25A22Q9H936 323 aa13.49□□□□□ -0.25
DDX49-213ENST00000602113 NIPBLQ6KC79 2804 aaeCLIP13.48□□□□□ -0.25
DDX49-213ENST00000602113 IGHV3-35A0A0C4DH35 117 aa13.48□□□□□ -0.25
DDX49-213ENST00000602113 SCGB2A1O75556 95 aa13.48□□□□□ -0.25
DDX49-213ENST00000602113 PLP1P60201 277 aa13.48□□□□□ -0.25
DDX49-213ENST00000602113 SPATA31B1PQ5VZV4 182 aa13.48□□□□□ -0.25
DDX49-213ENST00000602113 SPSB3Q6PJ21 355 aa13.48□□□□□ -0.25
DDX49-213ENST00000602113 OR51G1Q8NGK1 321 aa13.48□□□□□ -0.25
DDX49-213ENST00000602113 OR4F5Q8NH21 305 aa13.48□□□□□ -0.25
DDX49-213ENST00000602113 SEPSECSQ9HD40 501 aaKnown RBP13.48□□□□□ -0.25
DDX49-213ENST00000602113 DNAJC4Q9NNZ3 241 aa13.48□□□□□ -0.25
DDX49-213ENST00000602113 WI2-2373I1.2A0A1W2PRP0 233 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 TEX46H3BTG2 121 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 H2AFB1P0C5Y9 115 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 ORM2P19652 201 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 ARL3P36405 182 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 LYZP61626 148 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 OR1B1Q8NGR6 318 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 Q8WTZ3 238 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 RAB24Q969Q5 203 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 UBE2E2Q96LR5 201 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 ACTR3CQ9C0K3 210 aaPredicted RBP13.47□□□□□ -0.25
DDX49-213ENST00000602113 PUS1Q9Y606 427 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX49-213ENST00000602113 C2CD3Q4AC94 2353 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 HMGB3O15347 200 aaKnown RBP13.47□□□□□ -0.25
DDX49-213ENST00000602113 COX7A2P2O60397 106 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 OR2C1O95371 312 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 OR5G3P0C626 314 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 CDC34P49427 236 aaPredicted RBP13.47□□□□□ -0.25
DDX49-213ENST00000602113 HIST2H2BDQ6DRA6 164 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 ZNF600Q6ZNG1 722 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 LYPD6BQ8NI32 183 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 GATAD1Q8WUU5 269 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 MBD3L1Q8WWY6 194 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 HRH4Q9H3N8 390 aa13.47□□□□□ -0.25
DDX49-213ENST00000602113 CTXND1A0A1B0GTU2 59 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 A0A1B0GV50 99 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 CLPSL1A2RUU4 121 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 BMPR1BO00238 502 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 HYPMO75409 117 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 IL4P05112 153 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 PROK1P58294 105 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 RHOBP62745 196 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 FAM78BQ5VT40 261 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 MORN5Q5VZ52 161 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 C10orf113Q5VZT2 155 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 LCN15Q6UWW0 184 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 C18orf65Q6ZTR6 163 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 OR1L4Q8NGR5 311 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 SFT2D1Q8WV19 159 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 RNF125Q96EQ8 232 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 UHRF2Q96PU4 802 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 PBDC1Q9BVG4 233 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 C19orf24Q9BVV8 132 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 PEF1Q9UBV8 284 aaKnown RBP13.46□□□□□ -0.26
DDX49-213ENST00000602113 RNF114Q9Y508 228 aa13.46□□□□□ -0.26
DDX49-213ENST00000602113 SETD2Q9BYW2 2564 aaPredicted RBP13.46□□□□□ -0.26
DDX49-213ENST00000602113 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
DDX49-213ENST00000602113 HAX1O00165 279 aa13.45□□□□□ -0.26
DDX49-213ENST00000602113 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
DDX49-213ENST00000602113 CCL20P78556 96 aa13.45□□□□□ -0.26
DDX49-213ENST00000602113 USF2Q15853 346 aaPredicted RBP13.45□□□□□ -0.26
DDX49-213ENST00000602113 TOMM20LQ6UXN7 152 aa13.45□□□□□ -0.26
DDX49-213ENST00000602113 MIR17HGQ75NE6 70 aa13.45□□□□□ -0.26
DDX49-213ENST00000602113 PFDN5Q99471 154 aa13.45□□□□□ -0.26
DDX49-213ENST00000602113 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
DDX49-213ENST00000602113 MRPL27Q9P0M9 148 aaKnown RBP13.45□□□□□ -0.26
DDX49-213ENST00000602113 FUT9Q9Y231 359 aa13.45□□□□□ -0.26
DDX49-213ENST00000602113 IGHV3OR16-8A0A075B7F1 116 aa13.44□□□□□ -0.26
DDX49-213ENST00000602113 ELOA3CA0A087WX78 387 aaPredicted RBP13.44□□□□□ -0.26
DDX49-213ENST00000602113 MAP1LC3B2A6NCE7 125 aa13.44□□□□□ -0.26
DDX49-213ENST00000602113 LINC00862A6NCI5 91 aa13.44□□□□□ -0.26
DDX49-213ENST00000602113 CD28P10747 220 aa13.44□□□□□ -0.26
DDX49-213ENST00000602113 FGF8P55075 233 aaPredicted RBP13.44□□□□□ -0.26
DDX49-213ENST00000602113 MAP1LC3BQ9GZQ8 125 aa13.44□□□□□ -0.26
DDX49-213ENST00000602113 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
DDX49-213ENST00000602113 TRAV1-1A0A0B4J248 108 aa13.44□□□□□ -0.26
DDX49-213ENST00000602113 CDX1P47902 265 aaPredicted RBP13.44□□□□□ -0.26
DDX49-213ENST00000602113 RELQ04864 619 aaPredicted RBP13.44□□□□□ -0.26
DDX49-213ENST00000602113 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
DDX49-213ENST00000602113 C11orf44Q8N8P7 122 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms