RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 SMCO1Q147U7 214 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 SIGLEC15Q6ZMC9 328 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 LGI3Q8N145 548 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 DYNC2LI1Q8TCX1 351 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 RAB2BQ8WUD1 216 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 PRR13Q9NZ81 148 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 RSL24D1Q9UHA3 163 aaKnown RBP12.28□□□□□ -0.44
SCAF1-204ENST00000601038 SHPKQ9UHJ6 478 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 TRAV10A0A0B4J240 114 aa12.27□□□□□ -0.45
SCAF1-204ENST00000601038 H3BMM0 161 aa12.27□□□□□ -0.45
SCAF1-204ENST00000601038 ATP5IP56385 69 aaPredicted RBP12.27□□□□□ -0.45
SCAF1-204ENST00000601038 KLF9Q13886 244 aaPredicted RBP12.27□□□□□ -0.45
SCAF1-204ENST00000601038 Q6ZTC4 211 aa12.27□□□□□ -0.45
SCAF1-204ENST00000601038 LYZL2Q7Z4W2 148 aa12.27□□□□□ -0.45
SCAF1-204ENST00000601038 OR51G1Q8NGK1 321 aa12.27□□□□□ -0.45
SCAF1-204ENST00000601038 DTD1Q8TEA8 209 aa12.27□□□□□ -0.45
SCAF1-204ENST00000601038 AKR1C4P17516 323 aa12.26□□□□□ -0.45
SCAF1-204ENST00000601038 NUP62P37198 522 aaPredicted RBP12.26□□□□□ -0.45
SCAF1-204ENST00000601038 TMBIM6P55061 237 aa12.26□□□□□ -0.45
SCAF1-204ENST00000601038 SUPT4H1P63272 117 aaKnown RBP12.26□□□□□ -0.45
SCAF1-204ENST00000601038 RNF125Q96EQ8 232 aa12.26□□□□□ -0.45
SCAF1-204ENST00000601038 SOSTQ9BQB4 213 aa12.26□□□□□ -0.45
SCAF1-204ENST00000601038 BCL7BQ9BQE9 202 aa12.26□□□□□ -0.45
SCAF1-204ENST00000601038 RBKSQ9H477 322 aa12.26□□□□□ -0.45
SCAF1-204ENST00000601038 MCUBQ9NWR8 336 aa12.26□□□□□ -0.45
SCAF1-204ENST00000601038 PFDN2Q9UHV9 154 aa12.26□□□□□ -0.45
SCAF1-204ENST00000601038 IGHV4-4A0A075B6R2 117 aa12.25□□□□□ -0.45
SCAF1-204ENST00000601038 ANXA3P12429 323 aa12.25□□□□□ -0.45
SCAF1-204ENST00000601038 GPX4P36969 197 aaPredicted RBP12.25□□□□□ -0.45
SCAF1-204ENST00000601038 NKX2-1P43699 371 aaPredicted RBP12.25□□□□□ -0.45
SCAF1-204ENST00000601038 SRPXP78539 464 aa12.25□□□□□ -0.45
SCAF1-204ENST00000601038 OR8G2PQ6IF36 304 aa12.25□□□□□ -0.45
SCAF1-204ENST00000601038 XCL2Q9UBD3 114 aa12.25□□□□□ -0.45
SCAF1-204ENST00000601038 PIGBOS1A0A0B4J2F0 54 aa12.24□□□□□ -0.45
SCAF1-204ENST00000601038 ZFP92A6NM28 416 aa12.24□□□□□ -0.45
SCAF1-204ENST00000601038 HLA-DRB4P13762 266 aa12.24□□□□□ -0.45
SCAF1-204ENST00000601038 GAMTQ14353 236 aa12.24□□□□□ -0.45
SCAF1-204ENST00000601038 C12orf74Q32Q52 190 aa12.24□□□□□ -0.45
SCAF1-204ENST00000601038 RNF126Q9BV68 326 aa12.24□□□□□ -0.45
SCAF1-204ENST00000601038 CELA1Q9UNI1 258 aa12.24□□□□□ -0.45
SCAF1-204ENST00000601038 HLA-DRB4X5D2U9 266 aa12.24□□□□□ -0.45
SCAF1-204ENST00000601038 FABP12A6NFH5 140 aa12.23□□□□□ -0.45
SCAF1-204ENST00000601038 TNFSF8P32971 234 aa12.23□□□□□ -0.45
SCAF1-204ENST00000601038 OR1S1Q8NH92 325 aa12.23□□□□□ -0.45
SCAF1-204ENST00000601038 PBDC1Q9BVG4 233 aa12.23□□□□□ -0.45
SCAF1-204ENST00000601038 SLIRPQ9GZT3 109 aaKnown RBP12.23□□□□□ -0.45
SCAF1-204ENST00000601038 FRAS1Q86XX4 4008 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 IGKV1D-37A0A075B6S9 117 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 DEFB131BA0A096LNP1 70 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 PITX3O75364 302 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 FABP1P07148 127 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 ZNF90Q03938 601 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 C1orf194Q5T5A4 169 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 SLC35E1Q96K37 410 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 NEU1Q99519 415 aa12.22□□□□□ -0.45
SCAF1-204ENST00000601038 DUXBA0A1W2PPF3 345 aa12.21□□□□□ -0.45
SCAF1-204ENST00000601038 SNRPGP15A8MWD9 76 aa12.21□□□□□ -0.45
SCAF1-204ENST00000601038 ID1P41134 155 aa12.21□□□□□ -0.45
SCAF1-204ENST00000601038 TMEM128Q5BJH2 165 aa12.21□□□□□ -0.45
SCAF1-204ENST00000601038 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.45
SCAF1-204ENST00000601038 ZNF705AQ6ZN79 300 aaPredicted RBP12.21□□□□□ -0.45
SCAF1-204ENST00000601038 CLUHP3Q96NS8 147 aa12.21□□□□□ -0.45
SCAF1-204ENST00000601038 WDR12Q9GZL7 423 aaKnown RBP12.21□□□□□ -0.45
SCAF1-204ENST00000601038 SMIM9A6NGZ8 99 aa12.2□□□□□ -0.46
SCAF1-204ENST00000601038 AMBPP02760 352 aa12.2□□□□□ -0.46
SCAF1-204ENST00000601038 FAUP35544 74 aaKnown RBP12.2□□□□□ -0.46
SCAF1-204ENST00000601038 PSMB3P49720 205 aa12.2□□□□□ -0.46
SCAF1-204ENST00000601038 FOXI2Q6ZQN5 318 aa12.2□□□□□ -0.46
SCAF1-204ENST00000601038 ZNF767PQ75MW2 155 aa12.2□□□□□ -0.46
SCAF1-204ENST00000601038 LINC00052Q96N35 136 aa12.2□□□□□ -0.46
SCAF1-204ENST00000601038 TRGV9Q99603 122 aa12.2□□□□□ -0.46
SCAF1-204ENST00000601038 SAV1Q9H4B6 383 aaPredicted RBP12.2□□□□□ -0.46
SCAF1-204ENST00000601038 ZNF705FA8MVS1 300 aaPredicted RBP12.19□□□□□ -0.46
SCAF1-204ENST00000601038 H3BMQ9 156 aa12.19□□□□□ -0.46
SCAF1-204ENST00000601038 SOCS3O14543 225 aa12.19□□□□□ -0.46
SCAF1-204ENST00000601038 NOL3O60936 208 aaKnown RBP12.19□□□□□ -0.46
SCAF1-204ENST00000601038 ZNF705DP0CH99 300 aaPredicted RBP12.19□□□□□ -0.46
SCAF1-204ENST00000601038 ZNF705BP0CI00 300 aaPredicted RBP12.19□□□□□ -0.46
SCAF1-204ENST00000601038 SLC25A6P12236 298 aa12.19□□□□□ -0.46
SCAF1-204ENST00000601038 LYZP61626 148 aa12.19□□□□□ -0.46
SCAF1-204ENST00000601038 RAB11AP62491 216 aa12.19□□□□□ -0.46
SCAF1-204ENST00000601038 TMED4Q7Z7H5 227 aa12.19□□□□□ -0.46
SCAF1-204ENST00000601038 LRTM2Q8N967 370 aa12.19□□□□□ -0.46
SCAF1-204ENST00000601038 MCFD2Q8NI22 146 aa12.19□□□□□ -0.46
SCAF1-204ENST00000601038 TMEM189A5PLL7 270 aa12.18□□□□□ -0.46
SCAF1-204ENST00000601038 IGKV3-20P01619 116 aa12.18□□□□□ -0.46
SCAF1-204ENST00000601038 AP3S2P59780 193 aa12.18□□□□□ -0.46
SCAF1-204ENST00000601038 DEFB1P60022 68 aa12.18□□□□□ -0.46
SCAF1-204ENST00000601038 OR2F1Q13607 317 aa12.18□□□□□ -0.46
SCAF1-204ENST00000601038 SPATA31B1PQ5VZV4 182 aa12.18□□□□□ -0.46
SCAF1-204ENST00000601038 OR8I2Q8N0Y5 310 aa12.18□□□□□ -0.46
SCAF1-204ENST00000601038 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
SCAF1-204ENST00000601038 IGKV1OR2-108A0A075B7D4 117 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 ISLRO14498 428 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 MED6O75586 246 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 SPART-AS1P0CW21 52 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 P0DMU3 169 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms