RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 RNASE11Q8TAA1 199 aaKnown RBP11.8□□□□□ -0.52
USE1-208ENST00000600970 TMEM170AQ8WVE7 144 aa11.8□□□□□ -0.52
USE1-208ENST00000600970 C7orf50Q9BRJ6 194 aaKnown RBP11.8□□□□□ -0.52
USE1-208ENST00000600970 HEYLQ9NQ87 328 aaPredicted RBP11.8□□□□□ -0.52
USE1-208ENST00000600970 ID1P41134 155 aa11.79□□□□□ -0.52
USE1-208ENST00000600970 RORCP51449 518 aa11.79□□□□□ -0.52
USE1-208ENST00000600970 PSG9Q00887 426 aa11.79□□□□□ -0.52
USE1-208ENST00000600970 GSG1LQ6UXU4 331 aa11.79□□□□□ -0.52
USE1-208ENST00000600970 SLC24A4Q8NFF2 622 aa11.79□□□□□ -0.52
USE1-208ENST00000600970 ACY3Q96HD9 319 aa11.79□□□□□ -0.52
USE1-208ENST00000600970 KLK11Q9UBX7 282 aa11.79□□□□□ -0.52
USE1-208ENST00000600970 F6UB75 175 aa11.78□□□□□ -0.52
USE1-208ENST00000600970 SOCS3O14543 225 aa11.78□□□□□ -0.52
USE1-208ENST00000600970 PSMB3P49720 205 aa11.78□□□□□ -0.52
USE1-208ENST00000600970 FAM78BQ5VT40 261 aa11.78□□□□□ -0.52
USE1-208ENST00000600970 ETFRF1Q6IPR1 90 aa11.78□□□□□ -0.52
USE1-208ENST00000600970 COQ8AQ8NI60 647 aa11.78□□□□□ -0.52
USE1-208ENST00000600970 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.78□□□□□ -0.52
USE1-208ENST00000600970 COPZ2Q9P299 210 aa11.78□□□□□ -0.52
USE1-208ENST00000600970 SMIM31A0A1B0GVY4 71 aa11.77□□□□□ -0.53
USE1-208ENST00000600970 NUP62P37198 522 aaPredicted RBP11.77□□□□□ -0.53
USE1-208ENST00000600970 PAX9P55771 341 aa11.77□□□□□ -0.53
USE1-208ENST00000600970 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.53
USE1-208ENST00000600970 SPATA12Q7Z6I5 190 aa11.77□□□□□ -0.53
USE1-208ENST00000600970 FAM219AQ8IW50 185 aa11.77□□□□□ -0.53
USE1-208ENST00000600970 RNF125Q96EQ8 232 aa11.77□□□□□ -0.53
USE1-208ENST00000600970 MAGT1Q9H0U3 335 aa11.77□□□□□ -0.53
USE1-208ENST00000600970 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
USE1-208ENST00000600970 CEBPZOSA8MTT3 80 aa11.76□□□□□ -0.53
USE1-208ENST00000600970 APOA1P02647 267 aa11.76□□□□□ -0.53
USE1-208ENST00000600970 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
USE1-208ENST00000600970 LSM3P62310 102 aaKnown RBP11.76□□□□□ -0.53
USE1-208ENST00000600970 RNASE10Q5GAN6 216 aaKnown RBP11.76□□□□□ -0.53
USE1-208ENST00000600970 OR8G2PQ6IF36 304 aa11.76□□□□□ -0.53
USE1-208ENST00000600970 CCDC71LQ8N9Z2 235 aa11.76□□□□□ -0.53
USE1-208ENST00000600970 ZFAND1Q8TCF1 268 aa11.76□□□□□ -0.53
USE1-208ENST00000600970 PBDC1Q9BVG4 233 aa11.76□□□□□ -0.53
USE1-208ENST00000600970 A0A0J9YX75 114 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 CDS2O95674 445 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 CD3DP04234 171 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 RNASE12Q5GAN4 147 aaKnown RBP11.75□□□□□ -0.53
USE1-208ENST00000600970 EBLN2Q6P2I7 272 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 ARRDC1Q8N5I2 433 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 OR13C8Q8NGS7 320 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 LHFPL5Q8TAF8 219 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 GPR146Q96CH1 333 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 PFDN2Q9UHV9 154 aa11.75□□□□□ -0.53
USE1-208ENST00000600970 B3GALNT1O75752 331 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 NUDT3O95989 172 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 PRM2P04554 102 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 SUPT4H1P63272 117 aaKnown RBP11.74□□□□□ -0.53
USE1-208ENST00000600970 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 TMEM208Q9BTX3 173 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 TMEM222Q9H0R3 208 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 Q9H521 79 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 LINC00588Q9Y4M8 146 aa11.74□□□□□ -0.53
USE1-208ENST00000600970 LYRM9A8MSI8 78 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 A8MTW9 85 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 ISLRO14498 428 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 ELK1P19419 428 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 CCL18P55774 89 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 NMSQ5H8A3 153 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 C1orf194Q5T5A4 169 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 NOXA1Q86UR1 476 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 SELENOHQ8IZQ5 122 aaKnown RBP11.73□□□□□ -0.53
USE1-208ENST00000600970 OR4D10Q8NGI6 311 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 TERB2Q8NHR7 220 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 RBPMSQ93062 196 aaKnown RBP11.73□□□□□ -0.53
USE1-208ENST00000600970 RPRMQ9NS64 109 aa11.73□□□□□ -0.53
USE1-208ENST00000600970 ZNF705GA8MUZ8 300 aaPredicted RBP11.72□□□□□ -0.53
USE1-208ENST00000600970 F5H768 121 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 HPGDSO60760 199 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 DEFB130BP0DP73 79 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 DEFB130AP0DP74 79 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 ZNF90Q03938 601 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 KLF9Q13886 244 aaPredicted RBP11.72□□□□□ -0.53
USE1-208ENST00000600970 MEF2DQ14814 521 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 MARCH1Q8TCQ1 289 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 YIPF6Q96EC8 236 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 C20orf173Q96LM9 149 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 DOK5Q9P104 306 aa11.72□□□□□ -0.53
USE1-208ENST00000600970 IGKV1D-37A0A075B6S9 117 aa11.71□□□□□ -0.53
USE1-208ENST00000600970 TEX13DA0A0J9YY54 714 aaPredicted RBP11.71□□□□□ -0.53
USE1-208ENST00000600970 KRTAP10-2P60368 255 aa11.71□□□□□ -0.53
USE1-208ENST00000600970 LYZP61626 148 aa11.71□□□□□ -0.53
USE1-208ENST00000600970 SCGB2B2Q4G0G5 96 aa11.71□□□□□ -0.53
USE1-208ENST00000600970 OR52I2Q8NH67 350 aa11.71□□□□□ -0.53
USE1-208ENST00000600970 ABHD1Q96SE0 405 aa11.71□□□□□ -0.53
USE1-208ENST00000600970 ZFP92A6NM28 416 aa11.7□□□□□ -0.54
USE1-208ENST00000600970 TBPP20226 339 aa11.7□□□□□ -0.54
USE1-208ENST00000600970 FCN2Q15485 313 aa11.7□□□□□ -0.54
USE1-208ENST00000600970 TMEM268Q5VZI3 342 aa11.7□□□□□ -0.54
USE1-208ENST00000600970 OR8I2Q8N0Y5 310 aa11.7□□□□□ -0.54
USE1-208ENST00000600970 RTBDNQ9BSG5 229 aaPredicted RBP11.7□□□□□ -0.54
USE1-208ENST00000600970 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
USE1-208ENST00000600970 MTFP1Q9UDX5 166 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms