RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 SOD3P08294 240 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 ASIPP42127 132 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 SAMD13Q5VXD3 122 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 GLMPQ8WWB7 406 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 EPDR1Q9UM22 224 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 GATA3P23771 443 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 VN1R17PQ8TDU5 208 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 IL36BQ9NZH7 164 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 SPATA31B1PQ5VZV4 182 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 RPP21Q9H633 154 aaKnown RBP11.99□□□□□ -0.49
SYMPK-213ENST00000599460 PAM16Q9Y3D7 125 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 DENND4AQ7Z401 1863 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 MUC21A0A0G2JKD1 596 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 MUC21A0A140T8X8 626 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 MUC21Q5SSG8 566 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 MBD3L1Q8WWY6 194 aa11.99□□□□□ -0.49
SYMPK-213ENST00000599460 TRBV9A0A0B4J1U6 114 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 M0R381 172 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 AREGP15514 252 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 SRD5A1P18405 259 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 C15orf62A8K5M9 175 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 UBE2L6O14933 153 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 CIDEAO60543 219 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 CBLN1P23435 193 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 CIARTQ8N365 385 aaPredicted RBP11.98□□□□□ -0.49
SYMPK-213ENST00000599460 HSPB9Q9BQS6 159 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 LIME1Q9H400 295 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 RFNGQ9Y644 331 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 NPIPB6E9PJ23 425 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 WISP2O76076 250 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 SRSF4Q08170 494 aaKnown RBP11.98□□□□□ -0.49
SYMPK-213ENST00000599460 SIGLEC15Q6ZMC9 328 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 ZNF833PQ6ZTB9 187 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 TCF24Q7RTU0 167 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 ZNF329Q86UD4 541 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 TRGV9Q99603 122 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 ZGRF1Q86YA3 2104 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 BDP1A6H8Y1 2624 aa11.98□□□□□ -0.49
SYMPK-213ENST00000599460 DIRC3C9JPN6 131 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 C15orf65H3BRN8 121 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 NUDT3O95989 172 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 CNTFRP26992 372 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 RPL15P61313 204 aaKnown RBP11.97□□□□□ -0.49
SYMPK-213ENST00000599460 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 IGHV1-69DA0A0B4J2H0 117 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 FAM181BA6NEQ2 426 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 IGHV1-69P01742 117 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 SMAGPQ0VAQ4 97 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 SEM1Q6ZVN7 128 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 GRIFINA4D1Z8 144 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 TDGF1P3P51864 188 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 RPL23P62829 140 aaKnown RBP11.97□□□□□ -0.49
SYMPK-213ENST00000599460 RNASE2P10153 161 aaKnown RBP11.97□□□□□ -0.49
SYMPK-213ENST00000599460 GCSHP23434 173 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 YLPM1P49750 1951 aaKnown RBP11.97□□□□□ -0.49
SYMPK-213ENST00000599460 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.97□□□□□ -0.49
SYMPK-213ENST00000599460 PRB4P10163 310 aaPredicted RBP11.97□□□□□ -0.49
SYMPK-213ENST00000599460 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 C11orf53Q8IXP5 236 aa11.97□□□□□ -0.49
SYMPK-213ENST00000599460 SLC25A39Q9BZJ4 359 aaPredicted RBP11.97□□□□□ -0.49
SYMPK-213ENST00000599460 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
SYMPK-213ENST00000599460 AKAP6Q13023 2319 aa11.96□□□□□ -0.49
SYMPK-213ENST00000599460 TRBV7-1A0A0A6YYK4 115 aa11.96□□□□□ -0.49
SYMPK-213ENST00000599460 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
SYMPK-213ENST00000599460 SCRT1Q9BWW7 348 aa11.96□□□□□ -0.49
SYMPK-213ENST00000599460 STAG3L2P0CL84 134 aa11.96□□□□□ -0.49
SYMPK-213ENST00000599460 STAG3L3P0CL85 134 aa11.96□□□□□ -0.49
SYMPK-213ENST00000599460 LINC01587Q99440 93 aa11.96□□□□□ -0.49
SYMPK-213ENST00000599460 RNASE7Q9H1E1 156 aaKnown RBP11.96□□□□□ -0.49
SYMPK-213ENST00000599460 TRBV20OR9-2A0A075B6H5 130 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 A6NDN8 102 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 FBLL1A6NHQ2 334 aaKnown RBP11.96□□□□□ -0.5
SYMPK-213ENST00000599460 MMP23AO75900 390 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 ADORA2A-AS1P86434 159 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 SPRNQ5BIV9 151 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 ALPK3Q96L96 1907 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 NDUFS7O75251 213 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 MLANAQ16655 118 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 SPSB3Q6PJ21 355 aa11.96□□□□□ -0.5
SYMPK-213ENST00000599460 PMS2P5A8MQ11 134 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 PAX1P15863 534 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 RPL24P83731 157 aaKnown RBP11.95□□□□□ -0.5
SYMPK-213ENST00000599460 DMRTC2Q8IXT2 367 aaPredicted RBP11.95□□□□□ -0.5
SYMPK-213ENST00000599460 PCDH15Q96QU1 1955 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 WIPF3A6NGB9 483 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 A0A1W2PPI3 338 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 TCTAP57738 103 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 STHQ8IWL8 128 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 RNF166Q96A37 237 aaPredicted RBP11.95□□□□□ -0.5
SYMPK-213ENST00000599460 GTF3C1Q12789 2109 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 LYL1P12980 280 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 ZNF134P52741 427 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 PSG8Q9UQ74 426 aa11.95□□□□□ -0.5
SYMPK-213ENST00000599460 RPP25LQ8N5L8 163 aaKnown RBP11.94□□□□□ -0.5
SYMPK-213ENST00000599460 A0A1B0GUT8 65 aa11.94□□□□□ -0.5
SYMPK-213ENST00000599460 FGF23Q9GZV9 251 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms