RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ORM2P19652 201 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 BPIFB3P59826 476 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 CCDC168Q8NDH2 2452 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 TRBV20OR9-2A0A075B6H5 130 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 IGHV7-81A0A0B4J1V7 117 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 CXorf65A6NEN9 183 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 PGPEP1LA6NFU8 196 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 CXCL1P09341 107 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 PYYP10082 97 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 BRS3P32247 399 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 Q5PR19 223 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 PRSS57Q6UWY2 283 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 LINC00305Q7Z4B0 112 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 OR1B1Q8NGR6 318 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 RBM14Q96PK6 669 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 TMEM242Q9NWH2 141 aa13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 AURKAIP1Q9NWT8 199 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-216ENST00000598201 NPIPB5A8MRT5 1133 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 CLEC12BQ2HXU8 276 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 FANCD2OSQ96PS1 177 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 HSPB9Q9BQS6 159 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 CELSR1Q9NYQ6 3014 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 TGIF2-C20orf24A0A0A6YYL0 155 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 GGTLC3B5MD39 225 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 CLDN34H7C241 214 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 DSCR9P59020 149 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 TIGITQ495A1 244 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 BRD3OSQ6XYD6 125 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 C16orf82Q7Z2V1 217 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 OR5T1Q8NG75 326 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 GSN-AS1Q9NRJ2 163 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 S4R3C0 116 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 ARL2-SNX15V9GYD0 113 aa13.43□□□□□ -0.26
SHKBP1-216ENST00000598201 ELOA3CA0A087WX78 387 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 TRAV40A0A0B4J280 105 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 IGHV1-69DA0A0B4J2H0 117 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 IGKV1-17P01599 117 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 IGHV1-69P01742 117 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 S100A8P05109 93 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 PSG1P11464 419 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 UBE2L3P68036 154 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 LINC01551Q86U37 167 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 TTC9CQ8N5M4 171 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 C2CD4CQ8TF44 421 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 C11orf52Q96A22 123 aa13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 PRRC2AP48634 2157 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-216ENST00000598201 IGLV11-55A0A075B6I3 123 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 ZNF124Q15973 351 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 KRTAP1-3Q8IUG1 177 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 OR1L6Q8NGR2 347 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 PPP1R14DQ9NXH3 145 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 C1RLQ9NZP8 487 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 HLA-DRB1P01911 266 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 SNRPCP09234 159 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 IGHV4-38-2P0DP08 117 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 PAXXQ9BUH6 204 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 CTDSP1Q9GZU7 261 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 ZFHX3Q15911 3703 aa13.41□□□□□ -0.26
SHKBP1-216ENST00000598201 HYPMO75409 117 aa13.4□□□□□ -0.26
SHKBP1-216ENST00000598201 MSMBP08118 114 aa13.4□□□□□ -0.26
SHKBP1-216ENST00000598201 CRYBB3P26998 211 aa13.4□□□□□ -0.26
SHKBP1-216ENST00000598201 PLP1P60201 277 aa13.4□□□□□ -0.26
SHKBP1-216ENST00000598201 FXYD5Q96DB9 178 aa13.4□□□□□ -0.26
SHKBP1-216ENST00000598201 RASL11BQ9BPW5 248 aa13.4□□□□□ -0.26
SHKBP1-216ENST00000598201 OR51M1Q9H341 326 aa13.4□□□□□ -0.26
SHKBP1-216ENST00000598201 SOX21Q9Y651 276 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-216ENST00000598201 A0A1W2PRE2 83 aa13.4□□□□□ -0.27
SHKBP1-216ENST00000598201 SH2D7A6NKC9 451 aaPredicted RBP13.4□□□□□ -0.27
SHKBP1-216ENST00000598201 S100PP25815 95 aa13.4□□□□□ -0.27
SHKBP1-216ENST00000598201 SUMO1P63165 101 aaKnown RBP13.4□□□□□ -0.27
SHKBP1-216ENST00000598201 WFDC11Q8NEX6 87 aa13.4□□□□□ -0.27
SHKBP1-216ENST00000598201 A0A0U1RQK1 487 aa13.39□□□□□ -0.27
SHKBP1-216ENST00000598201 C1orf196B1AJZ1 125 aa13.39□□□□□ -0.27
SHKBP1-216ENST00000598201 LYZP61626 148 aa13.39□□□□□ -0.27
SHKBP1-216ENST00000598201 RELQ04864 619 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-216ENST00000598201 LEMD1Q68G75 181 aa13.39□□□□□ -0.27
SHKBP1-216ENST00000598201 Q96MF0 132 aa13.39□□□□□ -0.27
SHKBP1-216ENST00000598201 NECAP1Q8NC96 275 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 OCC1Q8TAD7 63 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 PIFOQ8TCI5 191 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 ELOVL1Q9BW60 279 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 C7orf69Q9H7B7 122 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 LINC01548A6NM66 108 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 F8W735 103 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 NDUFB8O95169 186 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 RD3LP0DJH9 198 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 HNF1AP20823 631 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 RPS10P46783 165 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 RAB5BP61020 215 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 TMEM219Q86XT9 240 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 AKAP9Q99996 3911 aa13.38□□□□□ -0.27
SHKBP1-216ENST00000598201 MYO9AB2RTY4 2548 aa13.37□□□□□ -0.27
SHKBP1-216ENST00000598201 H7BYZ3 331 aa13.37□□□□□ -0.27
SHKBP1-216ENST00000598201 S100A9P06702 114 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-216ENST00000598201 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
SHKBP1-216ENST00000598201 HIF1ANQ9NWT6 349 aa13.37□□□□□ -0.27
SHKBP1-216ENST00000598201 TEX15Q9BXT5 2789 aa13.37□□□□□ -0.27
SHKBP1-216ENST00000598201 ATP6V0E1O15342 81 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 OR2J3O76001 311 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 AVPP01185 164 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms