RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 PEX7O00628 323 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 IGLV1-44P01699 117 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 PPIAL4GP0DN37 164 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 TAS2R60P59551 318 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 VSTM2AQ8TAG5 236 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 SRSF12Q8WXF0 261 aaKnown RBP10.06□□□□□ -0.8
USHBP1-207ENST00000597928 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
USHBP1-207ENST00000597928 OR52E5Q8NH55 327 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 TMEM14BQ9NUH8 114 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 H0YJW9 148 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 F2RL2O00254 374 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 AMY1AP04745 511 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 MAS1LP35410 378 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 TMUB1Q9BVT8 246 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 TP73-AS1Q9UF72 201 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 FBXL7Q9UJT9 491 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 MBD3L4A6NDZ8 208 aaPredicted RBP10.05□□□□□ -0.8
USHBP1-207ENST00000597928 MBD3L3A6NE82 208 aaPredicted RBP10.05□□□□□ -0.8
USHBP1-207ENST00000597928 MBD3L5A6NJ08 208 aaPredicted RBP10.05□□□□□ -0.8
USHBP1-207ENST00000597928 TM4SF5O14894 197 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 GNG7O60262 68 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 ECSCRQ19T08 205 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 C11orf42Q8N5U0 333 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 NUDT10Q8NFP7 164 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 MBD3L2Q8NHZ7 208 aaPredicted RBP10.05□□□□□ -0.8
USHBP1-207ENST00000597928 FAM57AQ8TBR7 257 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 NUDT11Q96G61 164 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 SFXN3Q9BWM7 321 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 CDC42EP3Q9UKI2 254 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 LINC00312Q9Y6C7 94 aa10.05□□□□□ -0.8
USHBP1-207ENST00000597928 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 IL4P05112 153 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 VAMP3Q15836 100 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 RNASE6Q93091 150 aaKnown RBP10.04□□□□□ -0.8
USHBP1-207ENST00000597928 PERPQ96FX8 193 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 LINC00527Q9UJ94 153 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 PIEZO1Q92508 2521 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 A0A1W2PPI3 338 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 M0R3E3 92 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 SLAQ13239 276 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 OR8A1Q8NGG7 326 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 SCNM1Q9BWG6 230 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
USHBP1-207ENST00000597928 P0C879 139 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 PPOXP50336 477 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 WDR73Q6P4I2 378 aa10.04□□□□□ -0.8
USHBP1-207ENST00000597928 SLC25A48Q6ZT89 311 aaKnown RBP10.04□□□□□ -0.8
USHBP1-207ENST00000597928 PPIFP30405 207 aaKnown RBP10.03□□□□□ -0.8
USHBP1-207ENST00000597928 PRRX1P54821 245 aa10.03□□□□□ -0.8
USHBP1-207ENST00000597928 FOXL1Q12952 345 aa10.03□□□□□ -0.8
USHBP1-207ENST00000597928 PRSS3P2Q8NHM4 247 aa10.03□□□□□ -0.8
USHBP1-207ENST00000597928 CT45A10P0DMU9 189 aa10.03□□□□□ -0.8
USHBP1-207ENST00000597928 TBR1Q16650 682 aa10.03□□□□□ -0.8
USHBP1-207ENST00000597928 OSR1Q8TAX0 266 aaPredicted RBP10.03□□□□□ -0.8
USHBP1-207ENST00000597928 RBM14Q96PK6 669 aaKnown RBP10.03□□□□□ -0.8
USHBP1-207ENST00000597928 HIGD1AQ9Y241 93 aa10.03□□□□□ -0.8
USHBP1-207ENST00000597928 CTSZQ9UBR2 303 aa10.03□□□□□ -0.8
USHBP1-207ENST00000597928 TMEM178BH3BS89 294 aa10.02□□□□□ -0.81
USHBP1-207ENST00000597928 RPLP1P05386 114 aaKnown RBP10.02□□□□□ -0.81
USHBP1-207ENST00000597928 HIF1ANQ9NWT6 349 aa10.02□□□□□ -0.81
USHBP1-207ENST00000597928 V9GYV3 84 aa10.02□□□□□ -0.81
USHBP1-207ENST00000597928 HIST1H1EP10412 219 aaKnown RBP10.02□□□□□ -0.81
USHBP1-207ENST00000597928 RPL15P61313 204 aaKnown RBP10.02□□□□□ -0.81
USHBP1-207ENST00000597928 Q9H3A6 140 aa10.02□□□□□ -0.81
USHBP1-207ENST00000597928 LSM4Q9Y4Z0 139 aaKnown RBP10.02□□□□□ -0.81
USHBP1-207ENST00000597928 PAFAH1B2P68402 229 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 C17orf77Q96MU5 243 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 E7EQL1 145 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 TIMM23O14925 209 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 C3orf79P0CE67 100 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 PSG1P11464 419 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 UQCRFS1P47985 274 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 OR4F17Q8NGA8 305 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 HIVEP3Q5T1R4 2406 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 OR2J3O76001 311 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 RUSC1-AS1Q66K80 236 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 CENPVQ7Z7K6 275 aaPredicted RBP10.01□□□□□ -0.81
USHBP1-207ENST00000597928 KCNS1Q96KK3 526 aa10.01□□□□□ -0.81
USHBP1-207ENST00000597928 ZNF785A8K8V0 405 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 HLA-DQA1P01909 254 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 Q6ZS92 163 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 ORM1P02763 201 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 ZNF841Q6ZN19 808 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 Q8N7P7 452 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 TMEM116Q8NCL8 245 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 TCRBV4S1A1TA0A5B7 111 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 BMPR1BO00238 502 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 SIAH2O43255 324 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 IGHV1-8P0DP01 117 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 PTTG1IPP53801 180 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 PRR20EP86478 221 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 PRR20CP86479 221 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 PRR20DP86480 221 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 PRR20BP86481 221 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 PRR20AP86496 221 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 EIF4EBP1Q13541 118 aaPredicted RBP10□□□□□ -0.81
USHBP1-207ENST00000597928 RAB1CQ92928 201 aa10□□□□□ -0.81
USHBP1-207ENST00000597928 TMEM186Q96B77 213 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms