RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 U3KQK5 164 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 C7orf66A4D0T2 115 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 INMT-MINDY4F8WBC2 141 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 SIX6O95475 246 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 IL4P05112 153 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 OR2F1Q13607 317 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 ACOT7LQ6ZUV0 252 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 OR51G1Q8NGK1 321 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 C2orf50Q96LR7 162 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 METTL26Q96S19 204 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 MARVELD1Q9BSK0 173 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 MS4A6AQ9H2W1 248 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 RETNQ9HD89 108 aa8.28□□□□□ -1.08
VRK3-210ENST00000596121 C5orf51A6NDU8 294 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 ZFP92A6NM28 416 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 K7EPK0 472 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 METTL15P1P0C7V9 234 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 GATA2P23769 480 aaPredicted RBP8.27□□□□□ -1.09
VRK3-210ENST00000596121 P2RY1P47900 373 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 RPP30P78346 268 aaKnown RBP8.27□□□□□ -1.09
VRK3-210ENST00000596121 OR8G2PQ6IF36 304 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 GSG1LQ6UXU4 331 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 WFDC3Q8IUB2 231 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 APRG1Q8IVJ8 170 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 GLMPQ8WWB7 406 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 RAB40CQ96S21 281 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 TRGV9Q99603 122 aa8.27□□□□□ -1.09
VRK3-210ENST00000596121 OR4C46A6NHA9 309 aa8.26□□□□□ -1.09
VRK3-210ENST00000596121 SNRPGP15A8MWD9 76 aa8.26□□□□□ -1.09
VRK3-210ENST00000596121 BUB3O43684 328 aa8.26□□□□□ -1.09
VRK3-210ENST00000596121 SCGB2A1O75556 95 aa8.26□□□□□ -1.09
VRK3-210ENST00000596121 HNRNPCP07910 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
VRK3-210ENST00000596121 TAS2R30P59541 319 aa8.26□□□□□ -1.09
VRK3-210ENST00000596121 RNF125Q96EQ8 232 aa8.26□□□□□ -1.09
VRK3-210ENST00000596121 RCHY1Q96PM5 261 aa8.26□□□□□ -1.09
VRK3-210ENST00000596121 MAP6D1Q9H9H5 199 aa8.26□□□□□ -1.09
VRK3-210ENST00000596121 LSM5Q9Y4Y9 91 aaKnown RBP8.26□□□□□ -1.09
VRK3-210ENST00000596121 A0A1W2PS18 150 aa8.25□□□□□ -1.09
VRK3-210ENST00000596121 FAM24AA6NFZ4 105 aa8.25□□□□□ -1.09
VRK3-210ENST00000596121 TSC22D2O75157 780 aa8.25□□□□□ -1.09
VRK3-210ENST00000596121 DEFA1P59665 94 aa8.25□□□□□ -1.09
VRK3-210ENST00000596121 DEFA3P59666 94 aa8.25□□□□□ -1.09
VRK3-210ENST00000596121 RRAS2P62070 204 aaPredicted RBP8.25□□□□□ -1.09
VRK3-210ENST00000596121 RAB32Q13637 225 aa8.25□□□□□ -1.09
VRK3-210ENST00000596121 DCANP1Q8TF63 244 aa8.25□□□□□ -1.09
VRK3-210ENST00000596121 PBDC1Q9BVG4 233 aa8.25□□□□□ -1.09
VRK3-210ENST00000596121 GPN1Q9HCN4 374 aaPredicted RBP8.25□□□□□ -1.09
VRK3-210ENST00000596121 K7EQG2 157 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 GOSR2O14653 212 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 PRAF2O60831 178 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 EIF2B2P49770 351 aaKnown RBP8.24□□□□□ -1.09
VRK3-210ENST00000596121 LYZP61626 148 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 RPL11P62913 178 aaKnown RBP8.24□□□□□ -1.09
VRK3-210ENST00000596121 DLK1P80370 383 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 AKR1C1Q04828 323 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 TMEM144Q7Z5S9 345 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 STXBP6Q8NFX7 210 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 C17orf77Q96MU5 243 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 FAM110AQ9BQ89 295 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 TMEM231Q9H6L2 316 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 RABAC1Q9UI14 185 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 DNAH7Q8WXX0 4024 aa8.24□□□□□ -1.09
VRK3-210ENST00000596121 LOC102724200A0A096LPH7 203 aaPredicted RBP8.23□□□□□ -1.09
VRK3-210ENST00000596121 TRAV2A0A0B4J234 112 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 IGSF23A1L1A6 192 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 SMCO3A2RU48 225 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 H0YIZ8 118 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 DNASE2O00115 360 aaPredicted RBP8.23□□□□□ -1.09
VRK3-210ENST00000596121 CST7O76096 145 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 CD5P06127 495 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 BMI1P35226 326 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 H2BFSP57053 126 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 S100A10P60903 97 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 OR10P1Q8NGE3 313 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 WWC2-AS2Q96NR7 200 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 SPATA25Q9BR10 227 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 GGTLC1Q9BX51 225 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 ZMAT4Q9H898 229 aa8.23□□□□□ -1.09
VRK3-210ENST00000596121 L7N2F9 121 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 DEDDO75618 318 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 RPL35AP18077 110 aaKnown RBP8.22□□□□□ -1.09
VRK3-210ENST00000596121 BCAP31P51572 246 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 DEFB131AP59861 70 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 VAMP2P63027 116 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 PAFAH1B2P68402 229 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 LEMD1Q68G75 181 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 CYP2G1PQ6ZSU1 146 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 GRAMD2BQ96HH9 432 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 LYRM2Q9NU23 88 aaPredicted RBP8.22□□□□□ -1.09
VRK3-210ENST00000596121 AGRNO00468 2067 aa8.22□□□□□ -1.09
VRK3-210ENST00000596121 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.09
VRK3-210ENST00000596121 HELTA6NFD8 242 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 FNDC10F2Z333 226 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 FABP1P07148 127 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 ORM2P19652 201 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 CAV2P51636 162 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 SLC38A11Q08AI6 406 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 PATE2Q6UY27 113 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 SIGLEC15Q6ZMC9 328 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms