RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 IL15RAQ13261 267 aa11.87□□□□□ -0.51
USHBP1-205ENST00000595993 DEFB125Q8N687 156 aa11.87□□□□□ -0.51
USHBP1-205ENST00000595993 RNF2Q99496 336 aa11.87□□□□□ -0.51
USHBP1-205ENST00000595993 RHPN1-AS1Q9BWJ2 59 aa11.87□□□□□ -0.51
USHBP1-205ENST00000595993 WFDC10AQ9H1F0 79 aa11.87□□□□□ -0.51
USHBP1-205ENST00000595993 IGKV1OR2-108A0A075B7D4 117 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 C7orf66A4D0T2 115 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 K7EPK0 472 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 SCGB2A1O75556 95 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 SIX6O95475 246 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 TMEM14EPQ6UXP3 125 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 GSG1LQ6UXU4 331 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 RAB40CQ96S21 281 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 GINS3Q9BRX5 216 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 C11orf1Q9H5F2 150 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 SRD5A3Q9H8P0 318 aa11.86□□□□□ -0.51
USHBP1-205ENST00000595993 LSM5Q9Y4Y9 91 aaKnown RBP11.86□□□□□ -0.51
USHBP1-205ENST00000595993 TRAV25A0A0B4J276 109 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 IGHV3-66A0A0C4DH42 116 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 OR11H12B2RN74 326 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 GOSR2O14653 212 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 TOMM40O96008 361 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 METTL15P1P0C7V9 234 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 TAS2R30P59541 319 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 USF2Q15853 346 aaPredicted RBP11.85□□□□□ -0.51
USHBP1-205ENST00000595993 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 LILRB2Q8N423 598 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 LINC00476Q8WZB0 136 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 ST8SIA2Q92186 375 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 VSIRQ9H7M9 311 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 HERC2O95714 4834 aa11.85□□□□□ -0.51
USHBP1-205ENST00000595993 KMT2AQ03164 3969 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 ZFP92A6NM28 416 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 TSPAN4O14817 238 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 TSC22D2O75157 780 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 PTTG1O95997 202 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 PSG1P11464 419 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 ZNF90Q03938 601 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 RAB32Q13637 225 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 FAM90A2PQ658T7 463 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 OR8G2PQ6IF36 304 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 RBPMS2Q6ZRY4 209 aaKnown RBP11.84□□□□□ -0.51
USHBP1-205ENST00000595993 THAP8Q8NA92 274 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 Q8WTZ3 238 aa11.84□□□□□ -0.51
USHBP1-205ENST00000595993 DNAH10Q8IVF4 4471 aa11.83□□□□□ -0.52
USHBP1-205ENST00000595993 IL4P05112 153 aa11.83□□□□□ -0.52
USHBP1-205ENST00000595993 RD3LP0DJH9 198 aa11.83□□□□□ -0.52
USHBP1-205ENST00000595993 CRYBB3P26998 211 aa11.83□□□□□ -0.52
USHBP1-205ENST00000595993 ARL16Q0P5N6 197 aa11.83□□□□□ -0.52
USHBP1-205ENST00000595993 SPAG8Q99932 426 aaPredicted RBP11.83□□□□□ -0.52
USHBP1-205ENST00000595993 KRTAP17-1Q9BYP8 105 aa11.83□□□□□ -0.52
USHBP1-205ENST00000595993 L7N2F9 121 aa11.82□□□□□ -0.52
USHBP1-205ENST00000595993 NPPCP23582 126 aa11.82□□□□□ -0.52
USHBP1-205ENST00000595993 S100A10P60903 97 aa11.82□□□□□ -0.52
USHBP1-205ENST00000595993 VAMP2P63027 116 aa11.82□□□□□ -0.52
USHBP1-205ENST00000595993 OR51G1Q8NGK1 321 aa11.82□□□□□ -0.52
USHBP1-205ENST00000595993 METTL26Q96S19 204 aa11.82□□□□□ -0.52
USHBP1-205ENST00000595993 TRGV9Q99603 122 aa11.82□□□□□ -0.52
USHBP1-205ENST00000595993 U3KQE9 123 aa11.82□□□□□ -0.52
USHBP1-205ENST00000595993 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 DFFBO76075 338 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 H2BFSP57053 126 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 RRAS2P62070 204 aaPredicted RBP11.81□□□□□ -0.52
USHBP1-205ENST00000595993 DLK1P80370 383 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 AKR1C1Q04828 323 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 OR2F1Q13607 317 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 LAMTOR1Q6IAA8 161 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 TCF24Q7RTU0 167 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 OVOL2Q9BRP0 275 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 ALG5Q9Y673 324 aa11.81□□□□□ -0.52
USHBP1-205ENST00000595993 FAM24AA6NFZ4 105 aa11.8□□□□□ -0.52
USHBP1-205ENST00000595993 SSNA1O43805 119 aa11.8□□□□□ -0.52
USHBP1-205ENST00000595993 HNRNPCP07910 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
USHBP1-205ENST00000595993 P2RY1P47900 373 aa11.8□□□□□ -0.52
USHBP1-205ENST00000595993 TMEM182Q6ZP80 229 aaPredicted RBP11.8□□□□□ -0.52
USHBP1-205ENST00000595993 TMEM144Q7Z5S9 345 aa11.8□□□□□ -0.52
USHBP1-205ENST00000595993 GBGT1Q8N5D6 347 aa11.8□□□□□ -0.52
USHBP1-205ENST00000595993 RNF125Q96EQ8 232 aa11.8□□□□□ -0.52
USHBP1-205ENST00000595993 IGSF23A1L1A6 192 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 SMCO3A2RU48 225 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 GATA2P23769 480 aaPredicted RBP11.79□□□□□ -0.52
USHBP1-205ENST00000595993 BMI1P35226 326 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 TFPI2P48307 235 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 BCAP31P51572 246 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 CAV2P51636 162 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 ODF3L2Q3SX64 289 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 WFDC3Q8IUB2 231 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 STPG3Q8N7X2 389 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 OR10P1Q8NGE3 313 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 PBDC1Q9BVG4 233 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 GGTLC1Q9BX51 225 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 NMES1Q9C002 83 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 LYRM2Q9NU23 88 aaPredicted RBP11.79□□□□□ -0.52
USHBP1-205ENST00000595993 MGAT4CQ9UBM8 478 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 UBQLN2Q9UHD9 624 aa11.79□□□□□ -0.52
USHBP1-205ENST00000595993 HECTD4Q9Y4D8 3996 aa11.78□□□□□ -0.52
USHBP1-205ENST00000595993 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
USHBP1-205ENST00000595993 DEDDO75618 318 aa11.78□□□□□ -0.52
USHBP1-205ENST00000595993 CST7O76096 145 aa11.78□□□□□ -0.52
USHBP1-205ENST00000595993 LYZP61626 148 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms