RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 HSPE1P61604 102 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 PDLIM3Q53GG5 364 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 LCN12Q6JVE5 192 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 TCF24Q7RTU0 167 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 FAM19A2Q8N3H0 131 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 PRORYQ9H606 182 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 ST20Q9HBF5 79 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 OR51B2Q9Y5P1 312 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 TNCP24821 2201 aa13.79□□□□□ -0.2
SHKBP1-205ENST00000594973 MALRD1Q5VYJ5 2156 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 S100A7P31151 101 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 OPRK1P41145 380 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 KIAA1644Q3SXP7 199 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 TMEM155Q4W5P6 130 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 C12orf54Q6X4T0 127 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 ENY2Q9NPA8 101 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 OSTCQ9NRP0 149 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 GAGE12BA1L429 117 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 CORTO00230 105 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 NTF3P20783 257 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 GCSAMLQ5JQS6 135 aa13.78□□□□□ -0.2
SHKBP1-205ENST00000594973 FAM181BA6NEQ2 426 aa13.77□□□□□ -0.21
SHKBP1-205ENST00000594973 APOA2P02652 100 aa13.77□□□□□ -0.21
SHKBP1-205ENST00000594973 SAA1P0DJI8 122 aaPredicted RBP13.77□□□□□ -0.21
SHKBP1-205ENST00000594973 DLX6P56179 175 aa13.77□□□□□ -0.21
SHKBP1-205ENST00000594973 UBE2G1P62253 170 aa13.77□□□□□ -0.21
SHKBP1-205ENST00000594973 MPV17L2Q567V2 206 aa13.77□□□□□ -0.21
SHKBP1-205ENST00000594973 BVES-AS1Q5T3Y7 98 aa13.77□□□□□ -0.21
SHKBP1-205ENST00000594973 HARBI1Q96MB7 349 aa13.77□□□□□ -0.21
SHKBP1-205ENST00000594973 IGHV1-8P0DP01 117 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 AREGP15514 252 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 POU2AF1Q16633 256 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 AMMECR1LQ6DCA0 310 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 LHFPL4Q7Z7J7 247 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 RALYQ9UKM9 306 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 YTHDF2Q9Y5A9 579 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 UPK2O00526 184 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 CD5LO43866 347 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 MT-CO2P00403 227 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 APCSP02743 223 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 C18orf32Q8TCD1 76 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 MEGF9Q9H1U4 602 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 ZNF430Q9H8G1 570 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 C1RLQ9NZP8 487 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 PRNDQ9UKY0 176 aa13.76□□□□□ -0.21
SHKBP1-205ENST00000594973 OR2T8A6NH00 312 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 NPY1RP25929 384 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 RASL11AQ6T310 242 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 TNFRSF14Q92956 283 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 PRSS46E5RG02 174 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 Q56UQ5 140 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 EBLN2Q6P2I7 272 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 TREML4Q6UXN2 200 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 OR5AN1Q8NGI8 311 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 OR9G1Q8NH87 305 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 PLEKHA3Q9HB20 300 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 WASHC3Q9Y3C0 194 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 ARL2-SNX15V9GYD0 113 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 CFAP46Q8IYW2 2715 aa13.75□□□□□ -0.21
SHKBP1-205ENST00000594973 COL12A1Q99715 3063 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 HSBP1O75506 76 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 GCHFRP30047 84 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 PPOXP50336 477 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 KLF5Q13887 457 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 ZNF841Q6ZN19 808 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 TMEM186Q96B77 213 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 SVEP1Q4LDE5 3571 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 SMIM27A0A1W2PRY6 76 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 C2orf70A6NJV1 201 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 NUDT3O95989 172 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 OSR1Q8TAX0 266 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 WIPF2Q8TF74 440 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 TMEM133Q9H2Q1 129 aa13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 PEF1Q9UBV8 284 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-205ENST00000594973 TEX50A0A1B0GTY4 177 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 ISLRO14498 428 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 UQCRFS1P47985 274 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 PSG9Q00887 426 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 NABP2Q9BQ15 211 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 RAB1BQ9H0U4 201 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 IGHV3-72A0A0B4J1Y9 119 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 M0R2Z0 102 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 HLA-DRB1P01911 266 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 GNG4P50150 75 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 PRCDQ00LT1 54 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 TNXAQ16473 311 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 LINC00311Q8N616 119 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 ST6GALNAC6Q969X2 333 aa13.73□□□□□ -0.21
SHKBP1-205ENST00000594973 CRXO43186 299 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 IGLC1P0CG04 106 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 OR10W1Q8NGF6 305 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 OR4C13Q8NGP0 309 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 MGST2Q99735 147 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 ZNF257Q9Y2Q1 563 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 IZUMO1RA6ND01 250 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 SLC25A34Q6PIV7 304 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 ERASQ7Z444 233 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 C8orf31Q8N9H6 132 aa13.72□□□□□ -0.21
SHKBP1-205ENST00000594973 SSMEM1Q8WWF3 244 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms