RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 B9A039 149 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 M0R2Z0 102 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 PROP1O75360 226 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 HSBP1O75506 76 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 DEFA4P12838 97 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
PNKP-204ENST00000594661 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
PNKP-204ENST00000594661 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 EAF1Q96JC9 268 aaPredicted RBP12.47□□□□□ -0.41
PNKP-204ENST00000594661 TMEM70Q9BUB7 260 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 MS4A5Q9H3V2 200 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 SCRT2Q9NQ03 307 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 TRAV38-1A0A0B4J264 116 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 FCN3O75636 299 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 RAB9AP51151 201 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 ZNF134P52741 427 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 KLF5Q13887 457 aaPredicted RBP12.47□□□□□ -0.41
PNKP-204ENST00000594661 TMEM204Q9BSN7 226 aa12.47□□□□□ -0.41
PNKP-204ENST00000594661 TRGV10A0A0A0MS01 117 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 C9orf118A6NHY6 69 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 FCGR3BO75015 233 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 APCSP02743 223 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
PNKP-204ENST00000594661 RPL39P5Q59GN2 51 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 Q8N7P7 452 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 LEAP2Q969E1 77 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 NPFFR1Q9GZQ6 430 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 LRBAP50851 2863 aa12.46□□□□□ -0.41
PNKP-204ENST00000594661 KBTBD11-OT1A0A1B0GTJ5 212 aa12.46□□□□□ -0.42
PNKP-204ENST00000594661 SERTM2A0A1B0GWG4 89 aa12.46□□□□□ -0.42
PNKP-204ENST00000594661 ZG16O60844 167 aa12.46□□□□□ -0.42
PNKP-204ENST00000594661 UQCRFS1P47985 274 aa12.46□□□□□ -0.42
PNKP-204ENST00000594661 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.42
PNKP-204ENST00000594661 ZC2HC1AQ96GY0 325 aa12.46□□□□□ -0.42
PNKP-204ENST00000594661 IFI27L2Q9H2X8 130 aa12.46□□□□□ -0.42
PNKP-204ENST00000594661 FNDC4Q9H6D8 234 aaPredicted RBP12.46□□□□□ -0.42
PNKP-204ENST00000594661 TMEM8BA6NDV4 472 aa12.45□□□□□ -0.42
PNKP-204ENST00000594661 STAG3L3P0CL85 134 aa12.45□□□□□ -0.42
PNKP-204ENST00000594661 CRYBA4P53673 196 aa12.45□□□□□ -0.42
PNKP-204ENST00000594661 SPINK9Q5DT21 86 aa12.45□□□□□ -0.42
PNKP-204ENST00000594661 STXBP6Q8NFX7 210 aa12.45□□□□□ -0.42
PNKP-204ENST00000594661 JMJD8Q96S16 334 aa12.45□□□□□ -0.42
PNKP-204ENST00000594661 RAB9BQ9NP90 201 aa12.45□□□□□ -0.42
PNKP-204ENST00000594661 SLC25A10Q9UBX3 287 aaPredicted RBP12.45□□□□□ -0.42
PNKP-204ENST00000594661 HCFC1P51610 2035 aa12.45□□□□□ -0.42
PNKP-204ENST00000594661 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 H3BRM9 83 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 LYPD2Q6UXB3 125 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 OR5A1Q8NGJ0 315 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 HIVEP3Q5T1R4 2406 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 TNFRSF13BO14836 293 aaPredicted RBP12.44□□□□□ -0.42
PNKP-204ENST00000594661 GPR183P32249 361 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 RPL31P62899 125 aaKnown RBP12.44□□□□□ -0.42
PNKP-204ENST00000594661 SMAGPQ0VAQ4 97 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 TCTEX1D4Q5JR98 221 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 KIR3DL3Q8N743 410 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 MS4A6AQ9H2W1 248 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
PNKP-204ENST00000594661 HRNRQ86YZ3 2850 aaPredicted RBP12.44□□□□□ -0.42
PNKP-204ENST00000594661 hDV102S1A0JD36 115 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 TMEM189A5PLL7 270 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 STAG3L2P0CL84 134 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 PLP1P60201 277 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 CKS1BP61024 79 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 HSD52Q0P140 79 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 WIPF2Q8TF74 440 aaPredicted RBP12.43□□□□□ -0.42
PNKP-204ENST00000594661 S1PR3Q99500 378 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 TNFRSF19Q9NS68 423 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 TECRQ9NZ01 308 aaKnown RBP12.43□□□□□ -0.42
PNKP-204ENST00000594661 ARL2-SNX15V9GYD0 113 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 A0A087X0K7 114 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 SMIM27A0A1W2PRY6 76 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 PSMB11A5LHX3 300 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 SPINK4O60575 86 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 ARL14EPLP0DKL9 152 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 GNLYP22749 145 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 RPS16P62249 146 aaKnown RBP12.43□□□□□ -0.42
PNKP-204ENST00000594661 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 FAM120AOSQ5T036 256 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 PRAMEF5Q5TYX0 476 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 RASL11AQ6T310 242 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 C1orf229Q6ZS94 237 aaPredicted RBP12.43□□□□□ -0.42
PNKP-204ENST00000594661 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 LINC00574Q9H8X3 128 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 IDI2-AS1Q9NZ38 188 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 CTSZQ9UBR2 303 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 DCHS2Q6V1P9 2916 aa12.43□□□□□ -0.42
PNKP-204ENST00000594661 A0A1W2PPV4 95 aa12.42□□□□□ -0.42
PNKP-204ENST00000594661 LYNX1G3V0Z9 82 aa12.42□□□□□ -0.42
PNKP-204ENST00000594661 CXorf1O96002 111 aa12.42□□□□□ -0.42
PNKP-204ENST00000594661 LYNX1P0DP58 116 aa12.42□□□□□ -0.42
PNKP-204ENST00000594661 SLAQ13239 276 aa12.42□□□□□ -0.42
PNKP-204ENST00000594661 OR2K2Q8NGT1 345 aa12.42□□□□□ -0.42
PNKP-204ENST00000594661 AP1S3Q96PC3 154 aa12.42□□□□□ -0.42
PNKP-204ENST00000594661 PMCHL2Q9BQD1 86 aa12.42□□□□□ -0.42
PNKP-204ENST00000594661 YTHDF2Q9Y5A9 579 aaKnown RBP12.42□□□□□ -0.42
PNKP-204ENST00000594661 LINC00312Q9Y6C7 94 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms