RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 K7EPK0 472 aa16.34■□□□□ 0.21
HOMER3-206ENST00000594439 CCNKO75909 580 aa16.34■□□□□ 0.21
HOMER3-206ENST00000594439 DFFBO76075 338 aa16.34■□□□□ 0.21
HOMER3-206ENST00000594439 CD5P06127 495 aa16.34■□□□□ 0.21
HOMER3-206ENST00000594439 ACOT7LQ6ZUV0 252 aa16.34■□□□□ 0.21
HOMER3-206ENST00000594439 OR51G1Q8NGK1 321 aa16.34■□□□□ 0.21
HOMER3-206ENST00000594439 TRGV9Q99603 122 aa16.34■□□□□ 0.21
HOMER3-206ENST00000594439 IGKV3-7A0A075B6H7 116 aa16.33■□□□□ 0.2
HOMER3-206ENST00000594439 RBMY1BA6NDE4 496 aaKnown RBP16.33■□□□□ 0.2
HOMER3-206ENST00000594439 RBMY1EA6NEQ0 496 aaKnown RBP16.33■□□□□ 0.2
HOMER3-206ENST00000594439 HNRNPCP07910 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
HOMER3-206ENST00000594439 RBMY1DP0C7P1 496 aaKnown RBP16.33■□□□□ 0.2
HOMER3-206ENST00000594439 METTL15P1P0C7V9 234 aa16.33■□□□□ 0.2
HOMER3-206ENST00000594439 HAGHQ16775 308 aa16.33■□□□□ 0.2
HOMER3-206ENST00000594439 ODF3L2Q3SX64 289 aa16.33■□□□□ 0.2
HOMER3-206ENST00000594439 OR8G2PQ6IF36 304 aa16.33■□□□□ 0.2
HOMER3-206ENST00000594439 C11orf1Q9H5F2 150 aa16.33■□□□□ 0.2
HOMER3-206ENST00000594439 LSM5Q9Y4Y9 91 aaKnown RBP16.33■□□□□ 0.2
HOMER3-206ENST00000594439 P2RY1P47900 373 aa16.32■□□□□ 0.2
HOMER3-206ENST00000594439 RNF125Q96EQ8 232 aa16.32■□□□□ 0.2
HOMER3-206ENST00000594439 NARS2Q96I59 477 aaKnown RBP16.32■□□□□ 0.2
HOMER3-206ENST00000594439 CITED4Q96RK1 184 aa16.32■□□□□ 0.2
HOMER3-206ENST00000594439 TM2D3Q9BRN9 247 aa16.32■□□□□ 0.2
HOMER3-206ENST00000594439 UBQLN2Q9UHD9 624 aa16.32■□□□□ 0.2
HOMER3-206ENST00000594439 U3KQK5 164 aa16.32■□□□□ 0.2
HOMER3-206ENST00000594439 FABP1P07148 127 aa16.31■□□□□ 0.2
HOMER3-206ENST00000594439 TFPI2P48307 235 aa16.31■□□□□ 0.2
HOMER3-206ENST00000594439 OR2F1Q13607 317 aa16.31■□□□□ 0.2
HOMER3-206ENST00000594439 GBGT1Q8N5D6 347 aa16.31■□□□□ 0.2
HOMER3-206ENST00000594439 L7N2F9 121 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 VAMP2P63027 116 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 DLK1P80370 383 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 AKR1C1Q04828 323 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 C16orf54Q6UWD8 224 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 TMEM144Q7Z5S9 345 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 GRAMD2BQ96HH9 432 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 FAM110AQ9BQ89 295 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 MS4A6AQ9H2W1 248 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 RABAC1Q9UI14 185 aa16.3■□□□□ 0.2
HOMER3-206ENST00000594439 GOSR2O14653 212 aa16.29■□□□□ 0.2
HOMER3-206ENST00000594439 SIX6O95475 246 aa16.29■□□□□ 0.2
HOMER3-206ENST00000594439 PAFAH1B2P68402 229 aa16.29■□□□□ 0.2
HOMER3-206ENST00000594439 ARL16Q0P5N6 197 aa16.29■□□□□ 0.2
HOMER3-206ENST00000594439 RAB32Q13637 225 aa16.29■□□□□ 0.2
HOMER3-206ENST00000594439 OR10P1Q8NGE3 313 aa16.29■□□□□ 0.2
HOMER3-206ENST00000594439 GLMPQ8WWB7 406 aa16.29■□□□□ 0.2
HOMER3-206ENST00000594439 PBDC1Q9BVG4 233 aa16.29■□□□□ 0.2
HOMER3-206ENST00000594439 TRAV2A0A0B4J234 112 aa16.28■□□□□ 0.2
HOMER3-206ENST00000594439 FNDC10F2Z333 226 aa16.28■□□□□ 0.2
HOMER3-206ENST00000594439 BUB3O43684 328 aa16.28■□□□□ 0.2
HOMER3-206ENST00000594439 EIF2B2P49770 351 aaKnown RBP16.28■□□□□ 0.2
HOMER3-206ENST00000594439 S100A10P60903 97 aa16.28■□□□□ 0.2
HOMER3-206ENST00000594439 RRAS2P62070 204 aaPredicted RBP16.28■□□□□ 0.2
HOMER3-206ENST00000594439 RPL11P62913 178 aaKnown RBP16.28■□□□□ 0.2
HOMER3-206ENST00000594439 WFDC3Q8IUB2 231 aa16.28■□□□□ 0.2
HOMER3-206ENST00000594439 ZMAT4Q9H898 229 aa16.28■□□□□ 0.2
HOMER3-206ENST00000594439 SMCO3A2RU48 225 aa16.27■□□□□ 0.2
HOMER3-206ENST00000594439 LYZP61626 148 aa16.27■□□□□ 0.2
HOMER3-206ENST00000594439 TMEM182Q6ZP80 229 aaPredicted RBP16.27■□□□□ 0.2
HOMER3-206ENST00000594439 STPG3Q8N7X2 389 aa16.27■□□□□ 0.2
HOMER3-206ENST00000594439 RCHY1Q96PM5 261 aa16.27■□□□□ 0.2
HOMER3-206ENST00000594439 FAM24AA6NFZ4 105 aa16.26■□□□□ 0.19
HOMER3-206ENST00000594439 DNASE2O00115 360 aaPredicted RBP16.26■□□□□ 0.19
HOMER3-206ENST00000594439 PTTG1O95997 202 aa16.26■□□□□ 0.19
HOMER3-206ENST00000594439 CFDP00746 253 aaPredicted RBP16.26■□□□□ 0.19
HOMER3-206ENST00000594439 PVALBP20472 110 aaPredicted RBP16.26■□□□□ 0.19
HOMER3-206ENST00000594439 BCAP31P51572 246 aa16.26■□□□□ 0.19
HOMER3-206ENST00000594439 CMC4P56277 68 aaPredicted RBP16.26■□□□□ 0.19
HOMER3-206ENST00000594439 STXBP6Q8NFX7 210 aa16.26■□□□□ 0.19
HOMER3-206ENST00000594439 MAP6D1Q9H9H5 199 aa16.26■□□□□ 0.19
HOMER3-206ENST00000594439 HELTA6NFD8 242 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 K7EQG2 157 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 DEDDO75618 318 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 GATA2P23769 480 aaPredicted RBP16.25■□□□□ 0.19
HOMER3-206ENST00000594439 CAV2P51636 162 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 FAM24BQ8N5W8 94 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 BPIFCQ8NFQ6 507 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 SPATA25Q9BR10 227 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 GGTLC1Q9BX51 225 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 NPVFQ9HCQ7 196 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 MGAT4CQ9UBM8 478 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 TENM3Q9P273 2699 aa16.25■□□□□ 0.19
HOMER3-206ENST00000594439 LOC102724200A0A096LPH7 203 aaPredicted RBP16.24■□□□□ 0.19
HOMER3-206ENST00000594439 NUP62P37198 522 aaPredicted RBP16.24■□□□□ 0.19
HOMER3-206ENST00000594439 ZNF124Q15973 351 aa16.24■□□□□ 0.19
HOMER3-206ENST00000594439 CYP2G1PQ6ZSU1 146 aa16.24■□□□□ 0.19
HOMER3-206ENST00000594439 APRG1Q8IVJ8 170 aa16.24■□□□□ 0.19
HOMER3-206ENST00000594439 GGACTQ9BVM4 153 aa16.24■□□□□ 0.19
HOMER3-206ENST00000594439 NMES1Q9C002 83 aa16.24■□□□□ 0.19
HOMER3-206ENST00000594439 LYRM2Q9NU23 88 aaPredicted RBP16.24■□□□□ 0.19
HOMER3-206ENST00000594439 SSNA1O43805 119 aa16.23■□□□□ 0.19
HOMER3-206ENST00000594439 AP2S1P53680 142 aaPredicted RBP16.23■□□□□ 0.19
HOMER3-206ENST00000594439 H2BFSP57053 126 aa16.23■□□□□ 0.19
HOMER3-206ENST00000594439 DCANP1Q8TF63 244 aa16.23■□□□□ 0.19
HOMER3-206ENST00000594439 PFDN2Q9UHV9 154 aa16.23■□□□□ 0.19
HOMER3-206ENST00000594439 STAB2Q8WWQ8 2551 aa16.23■□□□□ 0.19
HOMER3-206ENST00000594439 IGSF23A1L1A6 192 aa16.22■□□□□ 0.19
HOMER3-206ENST00000594439 CST7O76096 145 aa16.22■□□□□ 0.19
HOMER3-206ENST00000594439 CYCSP99999 105 aaKnown RBP16.22■□□□□ 0.19
HOMER3-206ENST00000594439 SLC38A11Q08AI6 406 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms