RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 TIGITQ495A1 244 aa5.93□□□□□ -1.46
SMG9-202ENST00000594081 H2BFWTQ7Z2G1 175 aa5.93□□□□□ -1.46
SMG9-202ENST00000594081 C1orf158Q8N1D5 194 aa5.93□□□□□ -1.46
SMG9-202ENST00000594081 MCFD2Q8NI22 146 aa5.93□□□□□ -1.46
SMG9-202ENST00000594081 SMIM4Q8WVI0 70 aa5.93□□□□□ -1.46
SMG9-202ENST00000594081 SEC22AQ96IW7 307 aa5.93□□□□□ -1.46
SMG9-202ENST00000594081 C7orf50Q9BRJ6 194 aaKnown RBP5.93□□□□□ -1.46
SMG9-202ENST00000594081 SLC35B3Q9H1N7 401 aa5.93□□□□□ -1.46
SMG9-202ENST00000594081 SAV1Q9H4B6 383 aaPredicted RBP5.93□□□□□ -1.46
SMG9-202ENST00000594081 FNDC4Q9H6D8 234 aaPredicted RBP5.93□□□□□ -1.46
SMG9-202ENST00000594081 SEPSECSQ9HD40 501 aaKnown RBP5.93□□□□□ -1.46
SMG9-202ENST00000594081 U3KQE9 123 aa5.93□□□□□ -1.46
SMG9-202ENST00000594081 GPR31O00270 319 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 HLA-DMAP28067 261 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 S100A5P33763 92 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 SNCAP37840 140 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 XGP55808 180 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 HSPE1P61604 102 aaKnown RBP5.92□□□□□ -1.46
SMG9-202ENST00000594081 DLK1P80370 383 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 MEF2DQ14814 521 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 RNASE12Q5GAN4 147 aaKnown RBP5.92□□□□□ -1.46
SMG9-202ENST00000594081 DHRS11Q6UWP2 260 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 SIGLEC15Q6ZMC9 328 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 SSX7Q7RTT5 188 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 SLC35G3Q8N808 338 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 OR4X1Q8NH49 305 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 OR52I2Q8NH67 350 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 MRGPRFQ96AM1 343 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 ZNF486Q96H40 463 aaPredicted RBP5.92□□□□□ -1.46
SMG9-202ENST00000594081 DIRAS2Q96HU8 199 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 SLIRPQ9GZT3 109 aaKnown RBP5.92□□□□□ -1.46
SMG9-202ENST00000594081 RBM38Q9H0Z9 239 aaKnown RBP5.92□□□□□ -1.46
SMG9-202ENST00000594081 MIXL1Q9H2W2 232 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 Q9H3A6 140 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 FAM212BQ9NTI7 297 aaPredicted RBP5.92□□□□□ -1.46
SMG9-202ENST00000594081 MTFP1Q9UDX5 166 aa5.92□□□□□ -1.46
SMG9-202ENST00000594081 F5H768 121 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 IGKV1-39P01597 117 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 IGKV1D-39P04432 117 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 RNASE2P10153 161 aaKnown RBP5.91□□□□□ -1.46
SMG9-202ENST00000594081 FUSP35637 526 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMG9-202ENST00000594081 RFX2P48378 723 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 HOXA1P49639 335 aaPredicted RBP5.91□□□□□ -1.46
SMG9-202ENST00000594081 UCP3P55916 312 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 CLINT1Q14677 625 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 USF2Q15853 346 aaPredicted RBP5.91□□□□□ -1.46
SMG9-202ENST00000594081 IZUMO4Q1ZYL8 232 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 PHLDA2Q53GA4 152 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 FOXI2Q6ZQN5 318 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 CCDC71LQ8N9Z2 235 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 TMEM229BQ8NBD8 167 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 OR4B1Q8NGF8 309 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 RNF141Q8WVD5 230 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 CLUHP3Q96NS8 147 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 Q9H8V8 135 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 PTTG2Q9NZH5 202 aa5.91□□□□□ -1.46
SMG9-202ENST00000594081 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 TRAV30A0A087WSZ9 112 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 LYRM9A8MSI8 78 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 INS-IGF2F8WCM5 200 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 CTDSP2O14595 271 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 GSTZ1O43708 216 aaPredicted RBP5.9□□□□□ -1.46
SMG9-202ENST00000594081 RAB3DO95716 219 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 CD3DP04234 171 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 IL4P05112 153 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 IGLC1P0CG04 106 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 AKAIN1P0CW23 69 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 DEFB130BP0DP73 79 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 DEFB130AP0DP74 79 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 PGAM2P15259 253 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 FAUP35544 74 aaKnown RBP5.9□□□□□ -1.46
SMG9-202ENST00000594081 AP3S2P59780 193 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 ZNF79Q15937 498 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 MLANAQ16655 118 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 C4orf48Q5BLP8 95 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 STEAP1BQ6NZ63 245 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 TBC1D26Q86UD7 250 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 LYSMD2Q8IV50 215 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 COQ8AQ8NI60 647 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 DEDD2Q8WXF8 326 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 LINC00052Q96N35 136 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 ABHD1Q96SE0 405 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 PRRT1Q99946 306 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 NDUFA13Q9P0J0 144 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 MDFICQ9P1T7 246 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 KLK11Q9UBX7 282 aa5.9□□□□□ -1.46
SMG9-202ENST00000594081 A0A1W2PPQ1 181 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 FABP12A6NFH5 140 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 DISC1C4P0D8 188 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 F6UB75 175 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 M0QYG6 137 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 BUB3O43684 328 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 B3GALNT1O75752 331 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 ATG12O94817 140 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 RND2P52198 227 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 SUB1P53999 127 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMG9-202ENST00000594081 RND3P61587 244 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 PSG9Q00887 426 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 DHODHQ02127 395 aa5.89□□□□□ -1.47
SMG9-202ENST00000594081 SURF2Q15527 256 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms