RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 PFDN2Q9UHV9 154 aa16.29■□□□□ 0.2
SSBP4-203ENST00000593641 HLA-DRB4X5D2U9 266 aa16.29■□□□□ 0.2
SSBP4-203ENST00000593641 DNAH17Q9UFH2 4485 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 AKAIN1P0CW23 69 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 PSG1P11464 419 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 NKX2-1P43699 371 aaPredicted RBP16.28■□□□□ 0.2
SSBP4-203ENST00000593641 NMSQ5H8A3 153 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 POM121L12Q8N7R1 296 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 OR51G1Q8NGK1 321 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 RNF125Q96EQ8 232 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 GPR132Q9UNW8 380 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 TMEM56-RWDD3S4R434 201 aa16.28■□□□□ 0.2
SSBP4-203ENST00000593641 OR4C16Q8NGL9 310 aa16.27■□□□□ 0.2
SSBP4-203ENST00000593641 SMIM4Q8WVI0 70 aa16.27■□□□□ 0.2
SSBP4-203ENST00000593641 IL22RA2Q969J5 263 aa16.27■□□□□ 0.2
SSBP4-203ENST00000593641 PRRT1Q99946 306 aa16.27■□□□□ 0.2
SSBP4-203ENST00000593641 PBDC1Q9BVG4 233 aa16.27■□□□□ 0.2
SSBP4-203ENST00000593641 MIXL1Q9H2W2 232 aa16.27■□□□□ 0.2
SSBP4-203ENST00000593641 KCNIP3Q9Y2W7 256 aa16.27■□□□□ 0.2
SSBP4-203ENST00000593641 U3KQ87 197 aa16.27■□□□□ 0.2
SSBP4-203ENST00000593641 NEU1Q99519 415 aa16.26■□□□□ 0.19
SSBP4-203ENST00000593641 TMEM189A5PLL7 270 aa16.25■□□□□ 0.19
SSBP4-203ENST00000593641 SPART-AS1P0CW21 52 aa16.25■□□□□ 0.19
SSBP4-203ENST00000593641 KLF9Q13886 244 aaPredicted RBP16.25■□□□□ 0.19
SSBP4-203ENST00000593641 ZNF705AQ6ZN79 300 aaPredicted RBP16.25■□□□□ 0.19
SSBP4-203ENST00000593641 LGI3Q8N145 548 aa16.25■□□□□ 0.19
SSBP4-203ENST00000593641 DTD1Q8TEA8 209 aa16.25■□□□□ 0.19
SSBP4-203ENST00000593641 ZFP92A6NM28 416 aa16.24■□□□□ 0.19
SSBP4-203ENST00000593641 IGKV3-20P01619 116 aa16.24■□□□□ 0.19
SSBP4-203ENST00000593641 ID1P41134 155 aa16.24■□□□□ 0.19
SSBP4-203ENST00000593641 EMP1P54849 157 aa16.24■□□□□ 0.19
SSBP4-203ENST00000593641 OR8G2PQ6IF36 304 aa16.24■□□□□ 0.19
SSBP4-203ENST00000593641 OR51S1Q8NGJ8 323 aa16.24■□□□□ 0.19
SSBP4-203ENST00000593641 LINC00052Q96N35 136 aa16.24■□□□□ 0.19
SSBP4-203ENST00000593641 SCRT1Q9BWW7 348 aa16.24■□□□□ 0.19
SSBP4-203ENST00000593641 IGHV3OR16-12A0A075B7B8 117 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 SMIM9A6NGZ8 99 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 CCR6P51684 374 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 IL18Q14116 193 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 SMCO1Q147U7 214 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 GDF5OSQ5U4N7 250 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 CLVS1Q8IUQ0 354 aaPredicted RBP16.23■□□□□ 0.19
SSBP4-203ENST00000593641 COQ8AQ8NI60 647 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 PRR13Q9NZ81 148 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 HSPB7Q9UBY9 170 aa16.23■□□□□ 0.19
SSBP4-203ENST00000593641 MUC4Q99102 2169 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 ZNF705FA8MVS1 300 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-203ENST00000593641 CTDSP2O14595 271 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 CTDSPLO15194 276 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 ZNF705DP0CH99 300 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-203ENST00000593641 ZNF705BP0CI00 300 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-203ENST00000593641 FXYD7P58549 80 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 FOXI2Q6ZQN5 318 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 SLC35E1Q96K37 410 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 SCGB3A2Q96PL1 93 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 SAV1Q9H4B6 383 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-203ENST00000593641 RABL2AQ9UBK7 228 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-203ENST00000593641 SCP2D1Q9UJQ7 156 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 RABL2BQ9UNT1 228 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 RFNGQ9Y644 331 aa16.22■□□□□ 0.19
SSBP4-203ENST00000593641 A0A0B4J2A0 478 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 TEX48A0A1B0GUV7 120 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 PRSS29PA6NIE9 313 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 M0R2N4 97 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 FABP1P07148 127 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 SMIM18P0DKX4 95 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 PSMB3P49720 205 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 UBE2DNLQ8IWF7 75 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 DIRAS2Q96HU8 199 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 WDR12Q9GZL7 423 aaKnown RBP16.21■□□□□ 0.19
SSBP4-203ENST00000593641 RBKSQ9H477 322 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 SHPKQ9UHJ6 478 aa16.21■□□□□ 0.19
SSBP4-203ENST00000593641 A0A1B0GVY2 172 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 IFNA21P01568 189 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 ANXA3P12429 323 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 GPX4P36969 197 aaPredicted RBP16.2■□□□□ 0.18
SSBP4-203ENST00000593641 ATP5IP56385 69 aaPredicted RBP16.2■□□□□ 0.18
SSBP4-203ENST00000593641 DEFB1P60022 68 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 LYZP61626 148 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 SUPT4H1P63272 117 aaKnown RBP16.2■□□□□ 0.18
SSBP4-203ENST00000593641 OR4B1Q8NGF8 309 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 PPP1R14BQ96C90 147 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 FAM210BQ96KR6 192 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 DNAH11Q96DT5 4516 aa16.2■□□□□ 0.18
SSBP4-203ENST00000593641 DYNC1H1Q14204 4646 aaKnown RBP16.19■□□□□ 0.18
SSBP4-203ENST00000593641 RYR1P21817 5038 aa16.19■□□□□ 0.18
SSBP4-203ENST00000593641 AKR1C4P17516 323 aa16.19■□□□□ 0.18
SSBP4-203ENST00000593641 ZNF90Q03938 601 aa16.19■□□□□ 0.18
SSBP4-203ENST00000593641 GAMTQ14353 236 aa16.19■□□□□ 0.18
SSBP4-203ENST00000593641 C1orf194Q5T5A4 169 aa16.19■□□□□ 0.18
SSBP4-203ENST00000593641 LYZL2Q7Z4W2 148 aa16.19■□□□□ 0.18
SSBP4-203ENST00000593641 GPR141Q7Z602 305 aa16.19■□□□□ 0.18
SSBP4-203ENST00000593641 CLUHP3Q96NS8 147 aa16.19■□□□□ 0.18
SSBP4-203ENST00000593641 ANKRD20A5PA0PJZ0 165 aa16.18■□□□□ 0.18
SSBP4-203ENST00000593641 SNRPGP15A8MWD9 76 aa16.18■□□□□ 0.18
SSBP4-203ENST00000593641 SRPXP78539 464 aa16.18■□□□□ 0.18
SSBP4-203ENST00000593641 LGALS9BQ3B8N2 356 aa16.18■□□□□ 0.18
SSBP4-203ENST00000593641 SAMD13Q5VXD3 122 aa16.18■□□□□ 0.18
SSBP4-203ENST00000593641 SPATA31B1PQ5VZV4 182 aa16.18■□□□□ 0.18
SSBP4-203ENST00000593641 OR1S1Q8NH92 325 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms