RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 EMP1P54849 157 aa11.68□□□□□ -0.54
LIG1-205ENST00000593425 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
LIG1-205ENST00000593425 GSG1LQ6UXU4 331 aa11.68□□□□□ -0.54
LIG1-205ENST00000593425 OR51G1Q8NGK1 321 aa11.68□□□□□ -0.54
LIG1-205ENST00000593425 AP3S1Q92572 193 aa11.68□□□□□ -0.54
LIG1-205ENST00000593425 NEU1Q99519 415 aa11.68□□□□□ -0.54
LIG1-205ENST00000593425 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
LIG1-205ENST00000593425 IGHV3OR16-12A0A075B7B8 117 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 CRYM-AS1A6NIL9 109 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 GABARAPH6UMI1 98 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 GSTZ1O43708 216 aaPredicted RBP11.67□□□□□ -0.54
LIG1-205ENST00000593425 GABARAPO95166 117 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 ZNF182P17025 639 aaPredicted RBP11.67□□□□□ -0.54
LIG1-205ENST00000593425 NKX2-1P43699 371 aaPredicted RBP11.67□□□□□ -0.54
LIG1-205ENST00000593425 CTF1Q16619 201 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 LGALS9BQ3B8N2 356 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 NMSQ5H8A3 153 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 RNF125Q96EQ8 232 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 WDR12Q9GZL7 423 aaKnown RBP11.67□□□□□ -0.54
LIG1-205ENST00000593425 PRR13Q9NZ81 148 aa11.67□□□□□ -0.54
LIG1-205ENST00000593425 RYR1P21817 5038 aa11.66□□□□□ -0.54
LIG1-205ENST00000593425 IGLV2-18A0A075B6J9 118 aa11.66□□□□□ -0.54
LIG1-205ENST00000593425 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
LIG1-205ENST00000593425 ZNF709Q8N972 641 aa11.66□□□□□ -0.54
LIG1-205ENST00000593425 PBDC1Q9BVG4 233 aa11.66□□□□□ -0.54
LIG1-205ENST00000593425 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
LIG1-205ENST00000593425 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
LIG1-205ENST00000593425 TMEM56-RWDD3S4R434 201 aa11.66□□□□□ -0.54
LIG1-205ENST00000593425 ABCA13Q86UQ4 5058 aa11.65□□□□□ -0.54
LIG1-205ENST00000593425 SULT1A3P0DMM9 295 aa11.65□□□□□ -0.54
LIG1-205ENST00000593425 SULT1A4P0DMN0 295 aa11.65□□□□□ -0.54
LIG1-205ENST00000593425 SURF2Q15527 256 aaPredicted RBP11.65□□□□□ -0.54
LIG1-205ENST00000593425 C15orf40Q8WUR7 153 aa11.65□□□□□ -0.54
LIG1-205ENST00000593425 LINC00052Q96N35 136 aa11.65□□□□□ -0.54
LIG1-205ENST00000593425 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.54
LIG1-205ENST00000593425 DKK2Q9UBU2 259 aa11.65□□□□□ -0.54
LIG1-205ENST00000593425 IGKV1D-37A0A075B6S9 117 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 TMEM189A5PLL7 270 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 SMIM9A6NGZ8 99 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 DISC1C4P0D8 188 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 SOCS3O14543 225 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 IFNA10P01566 189 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 ZNF90Q03938 601 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 SSBP1Q04837 148 aaKnown RBP11.64□□□□□ -0.55
LIG1-205ENST00000593425 FAM222AQ5U5X8 452 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 Q6ZR54 194 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 UBE2DNLQ8IWF7 75 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 OR4C16Q8NGL9 310 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 SLC35B3Q9H1N7 401 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 RFNGQ9Y644 331 aa11.64□□□□□ -0.55
LIG1-205ENST00000593425 OR8G2PQ6IF36 304 aa11.63□□□□□ -0.55
LIG1-205ENST00000593425 NOXA1Q86UR1 476 aa11.63□□□□□ -0.55
LIG1-205ENST00000593425 OR4B1Q8NGF8 309 aa11.63□□□□□ -0.55
LIG1-205ENST00000593425 DTD1Q8TEA8 209 aa11.63□□□□□ -0.55
LIG1-205ENST00000593425 SMIM4Q8WVI0 70 aa11.63□□□□□ -0.55
LIG1-205ENST00000593425 RBKSQ9H477 322 aa11.63□□□□□ -0.55
LIG1-205ENST00000593425 HSPB7Q9UBY9 170 aa11.63□□□□□ -0.55
LIG1-205ENST00000593425 NACAE9PAV3 2078 aa11.63□□□□□ -0.55
LIG1-205ENST00000593425 ZFP92A6NM28 416 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 F6UB75 175 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 CTDSP2O14595 271 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 IFNA21P01568 189 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 AKAIN1P0CW23 69 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 SMIM18P0DKX4 95 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 NUP62P37198 522 aaPredicted RBP11.62□□□□□ -0.55
LIG1-205ENST00000593425 PSMB3P49720 205 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 MRPS10P82664 201 aaKnown RBP11.62□□□□□ -0.55
LIG1-205ENST00000593425 KLF9Q13886 244 aaPredicted RBP11.62□□□□□ -0.55
LIG1-205ENST00000593425 LGI3Q8N145 548 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 COQ8AQ8NI60 647 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 IL22RA2Q969J5 263 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 CLUHP3Q96NS8 147 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 NIPSNAP3BQ9BS92 247 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 U3KQ87 197 aa11.62□□□□□ -0.55
LIG1-205ENST00000593425 RGS5O15539 181 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 HTN3P15516 51 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 ID1P41134 155 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 CCR6P51684 374 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 LYZP61626 148 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 SUPT4H1P63272 117 aaKnown RBP11.61□□□□□ -0.55
LIG1-205ENST00000593425 GAMTQ14353 236 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 ZNF79Q15937 498 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 OR51S1Q8NGJ8 323 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 FAM210BQ96KR6 192 aa11.61□□□□□ -0.55
LIG1-205ENST00000593425 TEX48A0A1B0GUV7 120 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 PAX9P55771 341 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 OR2F1Q13607 317 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 SMCO1Q147U7 214 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 FAM78BQ5VT40 261 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 PRRT1Q99946 306 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 YTHDF2Q9Y5A9 579 aaKnown RBP11.6□□□□□ -0.55
LIG1-205ENST00000593425 MUC4Q99102 2169 aa11.6□□□□□ -0.55
LIG1-205ENST00000593425 A0A0B4J2A0 478 aa11.59□□□□□ -0.55
LIG1-205ENST00000593425 LOC102723971A0A1B0GUV8 181 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms