RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PGPA6NDG6 321 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 SPINK4O60575 86 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 AMY1AP04745 511 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 FRMD6-AS1P0C7T7 363 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 IGLC1P0CG04 106 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 GP9P14770 177 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 IZUMO1RA6ND01 250 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 ODF3BA8MYP8 253 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 GATCO43716 136 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 NUPR1O60356 82 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 PRTN3P24158 256 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 LYZP61626 148 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 KLRD1Q13241 179 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 LHFPL4Q7Z7J7 247 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 CFHR4Q92496 578 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 RASL11BQ9BPW5 248 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
PRKCSH-217ENST00000592741 ANKHD1Q8IWZ3 2542 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-217ENST00000592741 PSG1P11464 419 aa13.17□□□□□ -0.3
PRKCSH-217ENST00000592741 IQCJQ1A5X6 159 aa13.17□□□□□ -0.3
PRKCSH-217ENST00000592741 TMEM136Q6ZRR5 245 aa13.17□□□□□ -0.3
PRKCSH-217ENST00000592741 TPPP2P59282 170 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 SLC35B1P78383 322 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 Q0VG73 95 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 C5orf17Q8NAS9 161 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 NPBQ8NG41 125 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 GRAMD2BQ96HH9 432 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 TP53TG3Q9ULZ0 132 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 NDUFA3O95167 84 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 HLA-DQA1P01909 254 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 ESDP10768 282 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 RAB4BP61018 213 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 PAFAH1B2P68402 229 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 MRPL54Q6P161 138 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 DTX2Q86UW9 622 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 BAGE3Q86Y29 109 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 MS4A10Q96PG2 267 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 RPH3ALQ9UNE2 315 aa13.16□□□□□ -0.3
PRKCSH-217ENST00000592741 CA1P00915 261 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 DDTP30046 118 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 GPR6P46095 362 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 LEMD1Q68G75 181 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 MBD6Q96DN6 1003 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 KLF12Q9Y4X4 402 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 SERF1AO75920 110 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 HIST1H1EP10412 219 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 HES1Q14469 280 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 NUDT10Q8NFP7 164 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 NUDT11Q96G61 164 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 Q9H3A6 140 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 TMEM14CQ9P0S9 112 aa13.15□□□□□ -0.3
PRKCSH-217ENST00000592741 K7EIM0 57 aa13.14□□□□□ -0.31
PRKCSH-217ENST00000592741 ZNF600Q6ZNG1 722 aa13.14□□□□□ -0.31
PRKCSH-217ENST00000592741 KIR3DL3Q8N743 410 aa13.14□□□□□ -0.31
PRKCSH-217ENST00000592741 FAM168AQ92567 244 aa13.14□□□□□ -0.31
PRKCSH-217ENST00000592741 FMC1Q96HJ9 113 aa13.14□□□□□ -0.31
PRKCSH-217ENST00000592741 GPR82Q96P67 336 aa13.14□□□□□ -0.31
PRKCSH-217ENST00000592741 A0A1W2PRD5 423 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 A0A1W2PRF3 423 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 A0A1W2PRM7 423 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 SCGB1D1O95968 90 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 LINC00310P59036 64 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 CCDC144NLQ6NUI1 221 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 RASL11AQ6T310 242 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 NOL4LQ96MY1 436 aaPredicted RBP13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 C7orf69Q9H7B7 122 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 TOMM40O96008 361 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 IGKV1-17P01599 117 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 CD24P25063 80 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 C5orf64Q2M2E5 130 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 C1orf122Q6ZSJ8 110 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 ZNF664Q8N3J9 261 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 OTORQ9NRC9 128 aa13.13□□□□□ -0.31
PRKCSH-217ENST00000592741 H3BTX0 84 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 TCRAP04437 139 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 PAX1P15863 534 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 ASPHD1Q5U4P2 390 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 VMO1Q7Z5L0 202 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 WIPF2Q8TF74 440 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 TMEM68Q96MH6 324 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 RBM14Q96PK6 669 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 FAM103A1Q9BTL3 118 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 GNB4Q9HAV0 340 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 MRPL27Q9P0M9 148 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 OOSP1A8MZH6 123 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 REC114Q7Z4M0 266 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 IGFBPL1Q8WX77 278 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 SGK494Q96LW2 274 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 NAGKQ9UJ70 344 aa13.12□□□□□ -0.31
PRKCSH-217ENST00000592741 APCSP02743 223 aa13.11□□□□□ -0.31
PRKCSH-217ENST00000592741 KIAA1644Q3SXP7 199 aa13.11□□□□□ -0.31
PRKCSH-217ENST00000592741 NUP35Q8NFH5 326 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms