RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 RUSC1-AS1Q66K80 236 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 C22orf15Q8WYQ4 148 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 VWC2LB2RUY7 222 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 PRRG2O14669 202 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 GNG5P63218 68 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 CCL17Q92583 94 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 BORCS7Q96B45 105 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 LPAR2Q9HBW0 351 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 PLXNB1O43157 2135 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 VSTM5A8MXK1 200 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 DLEU1O43261 78 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 SLC25A5P05141 298 aaKnown RBP9.28□□□□□ -0.92
ZNF540-210ENST00000592533 NBEAP1P0C6P0 100 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
ZNF540-210ENST00000592533 RPL27AP46776 148 aaKnown RBP9.28□□□□□ -0.92
ZNF540-210ENST00000592533 CASP6P55212 293 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 C8orf46Q8TAG6 207 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 RPP21Q9H633 154 aaKnown RBP9.28□□□□□ -0.92
ZNF540-210ENST00000592533 MALRD1Q5VYJ5 2156 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 C20orf202A1L168 122 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 FAM231BA6NCW3 169 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 HYPMO75409 117 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 MOSP00540 346 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 IGLV1-47P01700 117 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 IGHV3-48P01763 117 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 FAM162BQ5T6X4 162 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 OR8B3Q8NGG8 313 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 OR1B1Q8NGR6 318 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 OR8B2Q96RD0 313 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 TMEM14CQ9P0S9 112 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 ZNF835Q9Y2P0 537 aa9.28□□□□□ -0.92
ZNF540-210ENST00000592533 TRBV6-1A0A0K0K1D8 114 aa9.27□□□□□ -0.92
ZNF540-210ENST00000592533 PGPA6NDG6 321 aa9.27□□□□□ -0.92
ZNF540-210ENST00000592533 FAM181BA6NEQ2 426 aa9.27□□□□□ -0.92
ZNF540-210ENST00000592533 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.92
ZNF540-210ENST00000592533 HOXB4P17483 251 aaPredicted RBP9.27□□□□□ -0.92
ZNF540-210ENST00000592533 TNXAQ16473 311 aa9.27□□□□□ -0.92
ZNF540-210ENST00000592533 FAM19A2Q8N3H0 131 aa9.27□□□□□ -0.92
ZNF540-210ENST00000592533 KLHDC1Q8N7A1 406 aa9.27□□□□□ -0.92
ZNF540-210ENST00000592533 SIGLEC9Q9Y336 463 aa9.27□□□□□ -0.92
ZNF540-210ENST00000592533 SHISA9B4DS77 424 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 RBP4P02753 201 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 ORM2P19652 201 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 HBBP68871 147 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 COL5A1-AS1Q5SY13 56 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 DMRTA1Q5VZB9 504 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 CLEC7AQ9BXN2 247 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 C1RLQ9NZP8 487 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 F11RQ9Y624 299 aaKnown RBP9.27□□□□□ -0.93
ZNF540-210ENST00000592533 ZGRF1Q86YA3 2104 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 A8MWL6 223 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 TEX22C9J3V5 150 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 PLAUP00749 431 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 TCRAP04437 139 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 G0S2P27469 103 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 ASPHD1Q5U4P2 390 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 C16orf54Q6UWD8 224 aa9.27□□□□□ -0.93
ZNF540-210ENST00000592533 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 SRSF8Q9BRL6 282 aaKnown RBP9.26□□□□□ -0.93
ZNF540-210ENST00000592533 CNOT1A5YKK6 2376 aaKnown RBP9.26□□□□□ -0.93
ZNF540-210ENST00000592533 IGHV2-26A0A0B4J1V2 119 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 LINC00614P0C842 121 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 CYB5R2Q6BCY4 276 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 PRR27Q6MZM9 219 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 HCP5Q6MZN7 132 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 LINC00322Q6ZN03 302 aaPredicted RBP9.26□□□□□ -0.93
ZNF540-210ENST00000592533 URB1-AS1Q96HZ7 61 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 Q9H3A6 140 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 BOD1L1Q8NFC6 3051 aa9.26□□□□□ -0.93
ZNF540-210ENST00000592533 EP300Q09472 2414 aaPredicted RBP9.26□□□□□ -0.93
ZNF540-210ENST00000592533 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
ZNF540-210ENST00000592533 HSBP1O75506 76 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 BTF3P20290 206 aaKnown RBP9.25□□□□□ -0.93
ZNF540-210ENST00000592533 BLNKQ8WV28 456 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 GTSF1Q8WW33 167 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 RNF5Q99942 180 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 MRPS16Q9Y3D3 137 aaKnown RBP9.25□□□□□ -0.93
ZNF540-210ENST00000592533 E7EQL1 145 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 NTF3P20783 257 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 EBLN2Q6P2I7 272 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 PRSS33Q8NF86 280 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 IGHV1-3A0A0C4DH29 117 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 IGHV1-69-2A0A0G2JMI3 117 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 A6NNC1 897 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 IGLC1P0CG04 106 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 RBPJQ06330 500 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 FAM120AOSQ5T036 256 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 RBPMS2Q6ZRY4 209 aaKnown RBP9.25□□□□□ -0.93
ZNF540-210ENST00000592533 Q86TA4 180 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 CHCHD1Q96BP2 118 aaKnown RBP9.25□□□□□ -0.93
ZNF540-210ENST00000592533 SSBP4Q9BWG4 385 aaPredicted RBP9.25□□□□□ -0.93
ZNF540-210ENST00000592533 NGBQ9NPG2 151 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 HIGD1AQ9Y241 93 aa9.25□□□□□ -0.93
ZNF540-210ENST00000592533 TRAV9-2A0A087WT02 112 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 BUB1B-PAK6H3BSN5 160 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 M0R2Z0 102 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 ENSAO43768 121 aaKnown RBP9.24□□□□□ -0.93
ZNF540-210ENST00000592533 P01737 135 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms