RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 TRAV30A0A087WSZ9 112 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 A0A087WW49 117 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 A0A1B0GV50 99 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 FNDC10F2Z333 226 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 TGOLN2O43493 480 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 CLN5O75503 358 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 CTSGP08311 255 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 GPR183P32249 361 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 Q56UQ5 140 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 TOR2AQ5JU69 321 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 PARD6GQ9BYG4 376 aaPredicted RBP13.12□□□□□ -0.31
RPRD1A-209ENST00000590898 OR2T8A6NH00 312 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 BMPR1BO00238 502 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 GNG7O60262 68 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 ARL3P36405 182 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 ELLP55199 621 aaPredicted RBP13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 GAMTQ14353 236 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 SLC35E1Q96K37 410 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 MRPL36Q9P0J6 103 aaKnown RBP13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 PKD1L1Q8TDX9 2849 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 AGPAT2O15120 278 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 NUPL2O15504 423 aaKnown RBP13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 SCGB2A1O75556 95 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 PF4P02776 101 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 SRSF3P84103 164 aaKnown RBP13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 TREML4Q6UXN2 200 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 GPHB5Q86YW7 130 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 NPCDR1Q9BY65 106 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 DNHD1Q96M86 4753 aa13.11□□□□□ -0.31
RPRD1A-209ENST00000590898 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 PPP5D1E7EU14 171 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 HOXD3P31249 432 aaPredicted RBP13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 RND2P52198 227 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 BLOC1S1P78537 153 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 DLK1P80370 383 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 AKR1C1Q04828 323 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 RPEL1Q2QD12 228 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 AKR1C8PQ5T2L2 129 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 DUX3Q96PT4 197 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 PSMG3Q9BT73 122 aaPredicted RBP13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 WDR83OSQ9Y284 106 aa13.1□□□□□ -0.31
RPRD1A-209ENST00000590898 UMAD1C9J7I0 102 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 TSPAN15O95858 294 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 ADMP35318 185 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 RAB5CP51148 216 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 KLF5Q13887 457 aaPredicted RBP13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 LYPD6BQ8NI32 183 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 NPIPB3Q92617 1050 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 MARC2Q969Z3 335 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 RPRMQ9NS64 109 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 WFDC9Q8NEX5 89 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 CHRDL1Q9BU40 450 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 TMEM231Q9H6L2 316 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 NPVFQ9HCQ7 196 aa13.09□□□□□ -0.31
RPRD1A-209ENST00000590898 OR2C1O95371 312 aa13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 RAB2AP61019 212 aa13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 RELQ04864 619 aaPredicted RBP13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 FAM106AQ4KMX7 169 aa13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 TMEM144Q7Z5S9 345 aa13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 EIF4E3Q8N5X7 224 aaKnown RBP13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 LINC00482Q8N8I6 264 aa13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 LINC00052Q96N35 136 aa13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 MGST2Q99735 147 aa13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 CMYA5Q8N3K9 4069 aa13.08□□□□□ -0.32
RPRD1A-209ENST00000590898 IGLC1P0CG04 106 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 ZNF726P1Q15940 193 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 IGKV1-17P01599 117 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 OR10J1P30954 320 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 SLURP1P55000 103 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 CCL20P78556 96 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 PRR31Q5SQ13 230 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 THAP8Q8NA92 274 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 DLX4Q92988 240 aaPredicted RBP13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 LSM4Q9Y4Z0 139 aaKnown RBP13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 TIMM9Q9Y5J7 89 aa13.07□□□□□ -0.32
RPRD1A-209ENST00000590898 IGKV1OR2-108A0A075B7D4 117 aa13.06□□□□□ -0.32
RPRD1A-209ENST00000590898 LGALS9O00182 355 aa13.06□□□□□ -0.32
RPRD1A-209ENST00000590898 NDUFA4O00483 81 aa13.06□□□□□ -0.32
RPRD1A-209ENST00000590898 SERF2P84101 59 aa13.06□□□□□ -0.32
RPRD1A-209ENST00000590898 GCSAMLQ5JQS6 135 aa13.06□□□□□ -0.32
RPRD1A-209ENST00000590898 FFAR4Q5NUL3 377 aa13.06□□□□□ -0.32
RPRD1A-209ENST00000590898 C1QL4Q86Z23 238 aa13.06□□□□□ -0.32
RPRD1A-209ENST00000590898 GGTLC1Q9BX51 225 aa13.06□□□□□ -0.32
RPRD1A-209ENST00000590898 IL34Q6ZMJ4 242 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 BPIFCQ8NFQ6 507 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 RCC1LQ96I51 464 aaKnown RBP13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 TRGV9Q99603 122 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 ZFP92A6NM28 416 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 OVOL1O14753 267 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 H2AFB1P0C5Y9 115 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 SYNJ2BPP57105 145 aa13.05□□□□□ -0.32
RPRD1A-209ENST00000590898 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms