RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TOMM40O96008 361 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 C10orf99Q6UWK7 81 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 COMMD7Q86VX2 200 aa13.54□□□□□ -0.24
CXXC1-212ENST00000589940 MAP1LC3B2A6NCE7 125 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 NUPL2O15504 423 aaKnown RBP13.53□□□□□ -0.24
CXXC1-212ENST00000589940 HBE1P02100 147 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 RHOBP62745 196 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 FOXE3Q13461 319 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 SPSB3Q6PJ21 355 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 LCN15Q6UWW0 184 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 CLEC19AQ6UXS0 136 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 LCNL1Q6ZST4 164 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 OR1L4Q8NGR5 311 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 GATAD1Q8WUU5 269 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 TMEM37Q8WXS4 190 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 PFDN5Q99471 154 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 CHRDL1Q9BU40 450 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 MAP1LC3BQ9GZQ8 125 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 SEPSECSQ9HD40 501 aaKnown RBP13.53□□□□□ -0.24
CXXC1-212ENST00000589940 DNAJC4Q9NNZ3 241 aa13.53□□□□□ -0.24
CXXC1-212ENST00000589940 A0A1B0GV50 99 aa13.52□□□□□ -0.24
CXXC1-212ENST00000589940 COX7A2P2O60397 106 aa13.52□□□□□ -0.24
CXXC1-212ENST00000589940 ELANEP08246 267 aa13.52□□□□□ -0.24
CXXC1-212ENST00000589940 ADMP35318 185 aa13.52□□□□□ -0.24
CXXC1-212ENST00000589940 PLP1P60201 277 aa13.52□□□□□ -0.24
CXXC1-212ENST00000589940 OR51G1Q8NGK1 321 aa13.52□□□□□ -0.24
CXXC1-212ENST00000589940 ELOA3CA0A087WX78 387 aaPredicted RBP13.52□□□□□ -0.25
CXXC1-212ENST00000589940 NUDT19A8MXV4 375 aa13.52□□□□□ -0.25
CXXC1-212ENST00000589940 EIF3GO75821 320 aaKnown RBP eCLIP13.52□□□□□ -0.25
CXXC1-212ENST00000589940 OR5G3P0C626 314 aa13.52□□□□□ -0.25
CXXC1-212ENST00000589940 FAM78BQ5VT40 261 aa13.52□□□□□ -0.25
CXXC1-212ENST00000589940 IL34Q6ZMJ4 242 aa13.52□□□□□ -0.25
CXXC1-212ENST00000589940 DOK5Q9P104 306 aa13.52□□□□□ -0.25
CXXC1-212ENST00000589940 HMGB3O15347 200 aaKnown RBP13.51□□□□□ -0.25
CXXC1-212ENST00000589940 TGOLN2O43493 480 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 ORM2P19652 201 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 SMUG1Q53HV7 270 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 PATE2Q6UY27 113 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 OR1B1Q8NGR6 318 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 MARC2Q969Z3 335 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 FUT9Q9Y231 359 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 TCF21O43680 179 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 HYPMO75409 117 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 FGF8P55075 233 aaPredicted RBP13.51□□□□□ -0.25
CXXC1-212ENST00000589940 LYZP61626 148 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 C10orf113Q5VZT2 155 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 SPATA31B1PQ5VZV4 182 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 COMMD1Q8N668 190 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 RNF152Q8N8N0 203 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 Q8WTZ3 238 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 RNF2Q99496 336 aa13.51□□□□□ -0.25
CXXC1-212ENST00000589940 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.5□□□□□ -0.25
CXXC1-212ENST00000589940 OR2C1O95371 312 aa13.5□□□□□ -0.25
CXXC1-212ENST00000589940 IGHV3-11P01762 117 aa13.5□□□□□ -0.25
CXXC1-212ENST00000589940 CCL20P78556 96 aa13.5□□□□□ -0.25
CXXC1-212ENST00000589940 MRPL32Q9BYC8 188 aaKnown RBP13.5□□□□□ -0.25
CXXC1-212ENST00000589940 KIAA0141Q14154 515 aaPredicted RBP13.49□□□□□ -0.25
CXXC1-212ENST00000589940 ZNF343Q6P1L6 599 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 MIR17HGQ75NE6 70 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 KLHDC1Q8N7A1 406 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 ZNF491Q8N8L2 437 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 MYOZ3Q8TDC0 251 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 C16orf95Q9H693 158 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 WI2-2373I1.2A0A1W2PRP0 233 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 IL4P05112 153 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 RPLP1P05386 114 aaKnown RBP13.49□□□□□ -0.25
CXXC1-212ENST00000589940 STAG3L2P0CL84 134 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 STAG3L3P0CL85 134 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 OR4X2Q8NGF9 303 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 RNF125Q96EQ8 232 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 PBDC1Q9BVG4 233 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 GNB4Q9HAV0 340 aa13.49□□□□□ -0.25
CXXC1-212ENST00000589940 RAB19A4D1S5 217 aa13.48□□□□□ -0.25
CXXC1-212ENST00000589940 UHRF2Q96PU4 802 aa13.48□□□□□ -0.25
CXXC1-212ENST00000589940 PUS1Q9Y606 427 aaKnown RBP eCLIP13.48□□□□□ -0.25
CXXC1-212ENST00000589940 PPP5D1E7EU14 171 aa13.48□□□□□ -0.25
CXXC1-212ENST00000589940 ARL3P36405 182 aa13.48□□□□□ -0.25
CXXC1-212ENST00000589940 LINC00305Q7Z4B0 112 aa13.48□□□□□ -0.25
CXXC1-212ENST00000589940 HIGD1AQ9Y241 93 aa13.48□□□□□ -0.25
CXXC1-212ENST00000589940 NIPBLQ6KC79 2804 aaeCLIP13.47□□□□□ -0.25
CXXC1-212ENST00000589940 TAS2R45P59539 299 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
CXXC1-212ENST00000589940 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 EIF4E3Q8N5X7 224 aaKnown RBP13.47□□□□□ -0.25
CXXC1-212ENST00000589940 ZNF414Q96IQ9 312 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 CITED4Q96RK1 184 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 TECRQ9NZ01 308 aaKnown RBP13.47□□□□□ -0.25
CXXC1-212ENST00000589940 MRPL27Q9P0M9 148 aaKnown RBP13.47□□□□□ -0.25
CXXC1-212ENST00000589940 MAST4O15021 2626 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 IGHV3-35A0A0C4DH35 117 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 NDUFA7O95182 113 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 CXorf1O96002 111 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 TRBV12-3P01733 135 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 ARL14EPLP0DKL9 152 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 MORN5Q5VZ52 161 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 OR5AU1Q8NGC0 362 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 LINC01006Q8NI28 216 aa13.47□□□□□ -0.25
CXXC1-212ENST00000589940 C8orf88P0DMB2 117 aa13.46□□□□□ -0.25
CXXC1-212ENST00000589940 USF2Q15853 346 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms