RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 A0A0G2JRQ6 117 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 C15orf62A8K5M9 175 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 RNF115Q9Y4L5 304 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 TSSC4Q9Y5U2 329 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 COA6Q5JTJ3 125 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 PPP1R32Q7Z5V6 425 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 PGPEP1Q9NXJ5 209 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 IGHV2OR16-5A0A0B4J2B6 119 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 CNTFRP26992 372 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 GOLGB1Q14789 3259 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 TRBV7-9A0A0J9YWB2 115 aa12.07□□□□□ -0.48
SMARCA4-214ENST00000589677 CD300EQ496F6 205 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 SAP25Q8TEE9 199 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 DPM3Q9P2X0 92 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 LYZL1Q6UWQ5 148 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 LIME1Q9H400 295 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 M0R2P5 195 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 IGLL1P15814 213 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 Q6ZRM9 215 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 TOMM40O96008 361 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 ZC2HC1BQ5TFG8 222 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 PRR7Q8TB68 274 aa12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 RSPO3Q9BXY4 272 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-214ENST00000589677 TMEM101Q96IK0 257 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 IMMP1LQ96LU5 166 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 MAP1BP46821 2468 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 CDPF1Q6NVV7 123 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 SLC25A15Q9Y619 301 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 KNTC1P50748 2209 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 GFRA3O60609 400 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 COX8AP10176 69 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 RRN3P1Q2M238 152 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 ZIC4Q8N9L1 334 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 MLNRO43193 412 aa12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 SPAG8Q99932 426 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-214ENST00000589677 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 TRAV21A0A0B4J279 112 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 TRGV9Q99603 122 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 C11orf68Q9H3H3 251 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 IGHV3OR16-13A0A075B7E8 117 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 IGHV3-74A0A0B4J1X5 117 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 EFNA2O43921 213 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 ZNF726P1Q15940 193 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 C2orf82Q6UX34 121 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 CT83Q5H943 113 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 ZNF562Q6V9R5 426 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 KLF12Q9Y4X4 402 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 CACNA1IQ9P0X4 2223 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 PSMB11A5LHX3 300 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 TNFRSF6BO95407 300 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 NCR2O95944 276 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 IGHV3-23P01764 117 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 ZNF138P52744 262 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 SPANXDQ9BXN6 97 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 S4R3C0 116 aa12.04□□□□□ -0.48
SMARCA4-214ENST00000589677 GAGE12HA6NDE8 117 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 ZNF329Q86UD4 541 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 ZNF492Q9P255 531 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 EFEMP2O95967 443 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 PAX9P55771 341 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 PLSCR4Q9NRQ2 329 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 IL15RAQ13261 267 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 FAM201AQ5SY85 155 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 BVES-AS1Q5T3Y7 98 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 PPP1R27Q86WC6 154 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 FGFBP3Q8TAT2 258 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 PLEKHB2Q96CS7 222 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 CEP290O15078 2479 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 SCN2AQ99250 2005 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 CELA3AP09093 270 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 IGHV1-2P23083 117 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 PPDPFLQ8WWR9 84 aa12.03□□□□□ -0.48
SMARCA4-214ENST00000589677 IGHV3-66A0A0C4DH42 116 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 LYPD1Q8N2G4 141 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 A0A1W2PPM0 123 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 GHRHP01286 108 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 CSRP2Q16527 193 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 KIF26BQ2KJY2 2108 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 TRBV20-1A0A075B6N2 111 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 IGKV1D-33P01593 117 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 IGKV1-33P01594 117 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 CELA3BP08861 270 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 MRPL14Q6P1L8 145 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 V9GYV3 84 aa12.02□□□□□ -0.49
SMARCA4-214ENST00000589677 NPIPB5A8MRT5 1133 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 HEATR5BQ9P2D3 2071 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 B9A039 149 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 LOC102723996A0A087X1L8 192 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 IGLC7A0M8Q6 106 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 PPIFP30405 207 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 ZNF71Q9NQZ8 489 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 C5orf63A6NC05 138 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 AZU1P20160 251 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 FAM231DQ6ZW35 169 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms