RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 SCPEP1Q9HB40 452 aa12.57□□□□□ -0.4
CXXC1-211ENST00000589548 ATG12O94817 140 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 PRM2P04554 102 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 RD3LP0DJH9 198 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 UCP1P25874 307 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 PSMB3P49720 205 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 PSG9Q00887 426 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 NEDD8Q15843 81 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 SLC24A4Q8NFF2 622 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 RNASEH2CQ8TDP1 164 aaKnown RBP12.56□□□□□ -0.4
CXXC1-211ENST00000589548 GPR146Q96CH1 333 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
CXXC1-211ENST00000589548 HEYLQ9NQ87 328 aaPredicted RBP12.56□□□□□ -0.4
CXXC1-211ENST00000589548 KLK11Q9UBX7 282 aa12.56□□□□□ -0.4
CXXC1-211ENST00000589548 PAX9P55771 341 aa12.55□□□□□ -0.4
CXXC1-211ENST00000589548 KRTAP10-2P60368 255 aa12.55□□□□□ -0.4
CXXC1-211ENST00000589548 FAM78BQ5VT40 261 aa12.55□□□□□ -0.4
CXXC1-211ENST00000589548 OR52E5Q8NH55 327 aa12.55□□□□□ -0.4
CXXC1-211ENST00000589548 RNF125Q96EQ8 232 aa12.55□□□□□ -0.4
CXXC1-211ENST00000589548 ACY3Q96HD9 319 aa12.55□□□□□ -0.4
CXXC1-211ENST00000589548 ELK1P19419 428 aa12.54□□□□□ -0.4
CXXC1-211ENST00000589548 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
CXXC1-211ENST00000589548 COQ8AQ8NI60 647 aa12.54□□□□□ -0.4
CXXC1-211ENST00000589548 RNASE11Q8TAA1 199 aaKnown RBP12.54□□□□□ -0.4
CXXC1-211ENST00000589548 LHFPL5Q8TAF8 219 aa12.54□□□□□ -0.4
CXXC1-211ENST00000589548 LINC00588Q9Y4M8 146 aa12.54□□□□□ -0.4
CXXC1-211ENST00000589548 A0A0J9YX75 114 aa12.53□□□□□ -0.4
CXXC1-211ENST00000589548 ID1P41134 155 aa12.53□□□□□ -0.4
CXXC1-211ENST00000589548 RNASE12Q5GAN4 147 aaKnown RBP12.53□□□□□ -0.4
CXXC1-211ENST00000589548 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
CXXC1-211ENST00000589548 C20orf173Q96LM9 149 aa12.53□□□□□ -0.4
CXXC1-211ENST00000589548 PBDC1Q9BVG4 233 aa12.53□□□□□ -0.4
CXXC1-211ENST00000589548 KRTAP1-5Q9BYS1 174 aa12.53□□□□□ -0.4
CXXC1-211ENST00000589548 MAGT1Q9H0U3 335 aa12.53□□□□□ -0.4
CXXC1-211ENST00000589548 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
CXXC1-211ENST00000589548 FAT1Q14517 4588 aa12.53□□□□□ -0.4
CXXC1-211ENST00000589548 A8MTW9 85 aa12.52□□□□□ -0.41
CXXC1-211ENST00000589548 NUDT3O95989 172 aa12.52□□□□□ -0.41
CXXC1-211ENST00000589548 LSM3P62310 102 aaKnown RBP12.52□□□□□ -0.41
CXXC1-211ENST00000589548 SPATA31B1PQ5VZV4 182 aa12.52□□□□□ -0.41
CXXC1-211ENST00000589548 OR13C8Q8NGS7 320 aa12.52□□□□□ -0.41
CXXC1-211ENST00000589548 COPZ2Q9P299 210 aa12.52□□□□□ -0.41
CXXC1-211ENST00000589548 CACNG5Q9UF02 275 aa12.52□□□□□ -0.41
CXXC1-211ENST00000589548 CEBPZOSA8MTT3 80 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 ZNF705GA8MUZ8 300 aaPredicted RBP12.51□□□□□ -0.41
CXXC1-211ENST00000589548 CDS2O95674 445 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 APOA1P02647 267 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 RNASE10Q5GAN6 216 aaKnown RBP12.51□□□□□ -0.41
CXXC1-211ENST00000589548 NMSQ5H8A3 153 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 OR8G2PQ6IF36 304 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 ETFRF1Q6IPR1 90 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 FAM219AQ8IW50 185 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 OR4D10Q8NGI6 311 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 IGF2BP2-AS1Q96M15 143 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 TMEM222Q9H0R3 208 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 COMMD3Q9UBI1 195 aa12.51□□□□□ -0.41
CXXC1-211ENST00000589548 IGKV1D-37A0A075B6S9 117 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 LYRM9A8MSI8 78 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 CD3DP04234 171 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 OR5AC1P0C628 307 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 NUP62P37198 522 aaPredicted RBP12.5□□□□□ -0.41
CXXC1-211ENST00000589548 SUPT4H1P63272 117 aaKnown RBP12.5□□□□□ -0.41
CXXC1-211ENST00000589548 ZNF90Q03938 601 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 MEF2DQ14814 521 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 FCN2Q15485 313 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 ARRDC1Q8N5I2 433 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 CCDC71LQ8N9Z2 235 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 GLYATL2Q8WU03 294 aa12.5□□□□□ -0.41
CXXC1-211ENST00000589548 SMIM31A0A1B0GVY4 71 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 F5H768 121 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 ISLRO14498 428 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 CRXO43186 299 aaPredicted RBP12.49□□□□□ -0.41
CXXC1-211ENST00000589548 CCL18P55774 89 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 SELENOHQ8IZQ5 122 aaKnown RBP12.49□□□□□ -0.41
CXXC1-211ENST00000589548 MARCH1Q8TCQ1 289 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 RNF141Q8WVD5 230 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 C17orf77Q96MU5 243 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 TMEM208Q9BTX3 173 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 DOK5Q9P104 306 aa12.49□□□□□ -0.41
CXXC1-211ENST00000589548 SRRM2Q9UQ35 2752 aaKnown RBP12.48□□□□□ -0.41
CXXC1-211ENST00000589548 C1orf194Q5T5A4 169 aa12.48□□□□□ -0.41
CXXC1-211ENST00000589548 ZFAND1Q8TCF1 268 aa12.48□□□□□ -0.41
CXXC1-211ENST00000589548 RBPMSQ93062 196 aaKnown RBP12.48□□□□□ -0.41
CXXC1-211ENST00000589548 YIPF6Q96EC8 236 aa12.48□□□□□ -0.41
CXXC1-211ENST00000589548 M0R2Z0 102 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 HPGDSO60760 199 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 B3GALNT1O75752 331 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 AZU1P20160 251 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 LYZP61626 148 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 SPINK13Q1W4C9 94 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 SSX7Q7RTT5 188 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 OR52I2Q8NH67 350 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 TERB2Q8NHR7 220 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 RPRMQ9NS64 109 aa12.47□□□□□ -0.41
CXXC1-211ENST00000589548 FLG2Q5D862 2391 aaPredicted RBP12.47□□□□□ -0.41
CXXC1-211ENST00000589548 MYCBP2O75592 4640 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms