RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	C17orf112	F2Z3M2	114 aa		12.36	□□□□□ -0.43
DDX39A-209	ENST00000589318	PAGE4	O60829	102 aa		12.36	□□□□□ -0.43
DDX39A-209	ENST00000589318	MC5R	P33032	325 aa		12.36	□□□□□ -0.43
DDX39A-209	ENST00000589318	WDR73	Q6P4I2	378 aa		12.36	□□□□□ -0.43
DDX39A-209	ENST00000589318		Q8N976	141 aa		12.36	□□□□□ -0.43
DDX39A-209	ENST00000589318	OR1L6	Q8NGR2	347 aa		12.36	□□□□□ -0.43
DDX39A-209	ENST00000589318	PIMREG	Q9BSJ6	248 aa		12.36	□□□□□ -0.43
DDX39A-209	ENST00000589318	IL36B	Q9NZH7	164 aa		12.36	□□□□□ -0.43
DDX39A-209	ENST00000589318	IGHV4-61	A0A0C4DH41	118 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	UBE2L5P	A0A1B0GUS4	154 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	NDUFS8	O00217	210 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	IGKV1D-33	P01593	117 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	IGKV1-33	P01594	117 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	COL8A1	P27658	744 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	HSPE1	P61604	102 aa	Known RBP	12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	RHOG	P84095	191 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	PET117	Q6UWS5	81 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	OR10G8	Q8NGN5	311 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	GNB1L	Q9BYB4	327 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	SLC25A22	Q9H936	323 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	FBXL7	Q9UJT9	491 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	PRND	Q9UKY0	176 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	INSIG2	Q9Y5U4	225 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	LY96	Q9Y6Y9	160 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	CENPE	Q02224	2701 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318		A0A1B0GUS0	222 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	GRIFIN	A4D1Z8	144 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	HOXB4	P17483	251 aa	Predicted RBP	12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	RPS16	P62249	146 aa	Known RBP	12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	ACSM6	Q6P461	480 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	RPE	Q96AT9	228 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	ZNF257	Q9Y2Q1	563 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	OR51B2	Q9Y5P1	312 aa		12.35	□□□□□ -0.43
DDX39A-209	ENST00000589318	SVEP1	Q4LDE5	3571 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	IGHV4-30-2	A0A087WSY4	118 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	TMEM11	P17152	192 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	HTR1D	P28221	377 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	TSPO	P30536	169 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	KRTDAP	P60985	99 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	ZNF90	Q03938	601 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	MRGPRG-AS1	Q2M3A8	158 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	FFAR4	Q5NUL3	377 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	LHFPL4	Q7Z7J7	247 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	TMEM167A	Q8TBQ9	72 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	SMIM12	Q96EX1	92 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	PERP	Q96FX8	193 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	KCNS1	Q96KK3	526 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	VPS25	Q9BRG1	176 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	DPM3	Q9P2X0	92 aa		12.34	□□□□□ -0.43
DDX39A-209	ENST00000589318	CLEC2A	Q6UVW9	174 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	CSTL1	Q9H114	145 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	PLXNB1	O43157	2135 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	TEX50	A0A1B0GTY4	177 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	FOXH1	O75593	365 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	PLA2G2A	P14555	144 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	GNB1	P62873	340 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	PRCD	Q00LT1	54 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	RNF151	Q2KHN1	245 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	MOB3B	Q86TA1	216 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	NRN1	Q9NPD7	142 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	HEYL	Q9NQ87	328 aa	Predicted RBP	12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	TPSG1	Q9NRR2	321 aa		12.33	□□□□□ -0.44
DDX39A-209	ENST00000589318	PTPN13	Q12923	2485 aa		12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	RRH	O14718	337 aa		12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	USF1	P22415	310 aa	Predicted RBP	12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	NPPC	P23582	126 aa		12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	LGALS7	P47929	136 aa		12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	CDC34	P49427	236 aa	Predicted RBP	12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	OR4A5	Q8NH83	315 aa		12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	VSTM2A	Q8TAG5	236 aa		12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	CFHR4	Q92496	578 aa		12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	TBL2	Q9Y4P3	447 aa	Known RBP	12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318	ANKRD17	O75179	2603 aa	Known RBP	12.32	□□□□□ -0.44
DDX39A-209	ENST00000589318		A0A1W2PRD5	423 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318		A0A1W2PRF3	423 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318		A0A1W2PRM7	423 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	PRSS46	E5RG02	174 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318		K7ERU9	68 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	FCN1	O00602	326 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	TIMM23	O14925	209 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	SLC25A17	O43808	307 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	TOX4	O94842	621 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	CRYGB	P07316	175 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	CD33	P20138	364 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	CNTFR	P26992	372 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	KRTAP10-9	P60411	292 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	RHOB	P62745	196 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	RPL8	P62917	257 aa	Known RBP	12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	VWC2	Q2TAL6	325 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	OR10P1	Q8NGE3	313 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	ZNF430	Q9H8G1	570 aa	Predicted RBP	12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	MAP1A	P78559	2803 aa	Predicted RBP	12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	IGLC7	A0M8Q6	106 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	CGB1	A6NKQ9	187 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318		E7EUB6	86 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	CBLN1	P23435	193 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	LGALS4	P56470	323 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	OCIAD2	Q56VL3	154 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	DYNAP	Q8N1N2	210 aa		12.31	□□□□□ -0.44
DDX39A-209	ENST00000589318	HILPDA	Q9Y5L2	63 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms