RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 UBR5O95071 2799 aaPredicted RBP12.11□□□□□ -0.47
MBD1-217ENST00000588937 NCBP2LA6PVI3 153 aaKnown RBP12.1□□□□□ -0.47
MBD1-217ENST00000588937 NPIPB5A8MRT5 1133 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 PEX7O00628 323 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 ISLRO14498 428 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 PSG1P11464 419 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 CD24P25063 80 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 PDLIM4P50479 330 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 RPEL1Q2QD12 228 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 TMEM190Q8WZ59 177 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 IGF2BP2-AS1Q96M15 143 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 LPAR2Q9HBW0 351 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 TRAPPC1Q9Y5R8 145 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 TRAV30A0A087WSZ9 112 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 PCP4L1A6NKN8 68 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 K7EIM0 57 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 NBEAP1P0C6P0 100 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 FAM106CPP0CH98 169 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 RD3LP0DJH9 198 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 TMEM11P17152 192 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 LMO4P61968 165 aa12.1□□□□□ -0.47
MBD1-217ENST00000588937 RBM14Q96PK6 669 aaKnown RBP12.1□□□□□ -0.47
MBD1-217ENST00000588937 HRNRQ86YZ3 2850 aaPredicted RBP12.1□□□□□ -0.47
MBD1-217ENST00000588937 LRBAP50851 2863 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 IFITM10A6NMD0 228 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 BRS3P32247 399 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 MYCNOSP40205 109 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 RPL15P61313 204 aaKnown RBP12.09□□□□□ -0.47
MBD1-217ENST00000588937 LYZP61626 148 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 COA6Q5JTJ3 125 aaKnown RBP12.09□□□□□ -0.47
MBD1-217ENST00000588937 S100A7AQ86SG5 101 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 TMEM183AQ8IXX5 376 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 DYNAPQ8N1N2 210 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 V9GYV3 84 aa12.09□□□□□ -0.47
MBD1-217ENST00000588937 ARHGAP32A7KAX9 2087 aa12.08□□□□□ -0.47
MBD1-217ENST00000588937 SLC17A3O00476 420 aa12.08□□□□□ -0.48
MBD1-217ENST00000588937 CX3CL1P78423 397 aa12.08□□□□□ -0.48
MBD1-217ENST00000588937 OR5I1Q13606 314 aa12.08□□□□□ -0.48
MBD1-217ENST00000588937 TTC9CQ8N5M4 171 aa12.08□□□□□ -0.48
MBD1-217ENST00000588937 GSX1Q9H4S2 264 aaPredicted RBP12.08□□□□□ -0.48
MBD1-217ENST00000588937 THYN1Q9P016 225 aa12.08□□□□□ -0.48
MBD1-217ENST00000588937 TMEM14CQ9P0S9 112 aa12.08□□□□□ -0.48
MBD1-217ENST00000588937 XKRY2A2RUG3 117 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 TOMM40O96008 361 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 IGLV2-8P01709 118 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 MGST1P10620 155 aaKnown RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 GP9P14770 177 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 YPEL3P61236 119 aaPredicted RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 IBA57Q5T440 356 aaKnown RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 ZNF48Q96MX3 618 aaPredicted RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 TBX15Q96SF7 602 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 SPOCK3Q9BQ16 436 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 FAM103A1Q9BTL3 118 aaKnown RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 RNF24Q9Y225 148 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 PGPA6NDG6 321 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 IGKV1-17P01599 117 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 SLC25A5P05141 298 aaKnown RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 HIST1H1BP16401 226 aaKnown RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 TMEM183BQ1AE95 376 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 GFI1BQ5VTD9 330 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 SMIM12Q96EX1 92 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 TMEM68Q96MH6 324 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 CHRDL1Q9BU40 450 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 SLC25A39Q9BZJ4 359 aaPredicted RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 NIT2Q9NQR4 276 aa12.07□□□□□ -0.48
MBD1-217ENST00000588937 MRPL27Q9P0M9 148 aaKnown RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 POLR3KQ9Y2Y1 108 aaPredicted RBP12.07□□□□□ -0.48
MBD1-217ENST00000588937 IGLV11-55A0A075B6I3 123 aa12.06□□□□□ -0.48
MBD1-217ENST00000588937 MFAP4P55083 255 aa12.06□□□□□ -0.48
MBD1-217ENST00000588937 UBE2G1P62253 170 aa12.06□□□□□ -0.48
MBD1-217ENST00000588937 COX19Q49B96 90 aa12.06□□□□□ -0.48
MBD1-217ENST00000588937 BAGE2Q86Y30 109 aa12.06□□□□□ -0.48
MBD1-217ENST00000588937 C5orf17Q8NAS9 161 aa12.06□□□□□ -0.48
MBD1-217ENST00000588937 TRBV9A0A0B4J1U6 114 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 GNG7O60262 68 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 IGHV4-39P01824 125 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 PDZD11Q5EBL8 140 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 ZNF600Q6ZNG1 722 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 FAM231DQ6ZW35 169 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 OR10D4PQ8NGN7 298 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 IGFBPL1Q8WX77 278 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 PIMREGQ9BSJ6 248 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 RNASE7Q9H1E1 156 aaKnown RBP12.05□□□□□ -0.48
MBD1-217ENST00000588937 SPTAN1Q13813 2472 aaKnown RBP12.05□□□□□ -0.48
MBD1-217ENST00000588937 HIST1H1EP10412 219 aaKnown RBP12.05□□□□□ -0.48
MBD1-217ENST00000588937 FABP4P15090 132 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.48
MBD1-217ENST00000588937 FBLN7Q53RD9 439 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 ASPHD1Q5U4P2 390 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 FANCD2OSQ96PS1 177 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 CCL19Q99731 98 aa12.05□□□□□ -0.48
MBD1-217ENST00000588937 ATG101Q9BSB4 218 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms