RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ANK3Q12955 4377 aaKnown RBP11.71□□□□□ -0.53
CCDC43-203ENST00000588210 HIVEP2P31629 2446 aa11.71□□□□□ -0.53
CCDC43-203ENST00000588210 TEP1Q99973 2627 aaKnown RBP11.71□□□□□ -0.54
CCDC43-203ENST00000588210 TLN2Q9Y4G6 2542 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 LOC105371242A0A075B767 164 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 GGTLC3B5MD39 225 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 INAFM1C9JVW0 142 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 INS-IGF2F8WCM5 200 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 J3QLI3 93 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 APOA2P02652 100 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 CRISP2P16562 243 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 TPPP2P59282 170 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 GNB1LQ9BYB4 327 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 ZNRD1Q9P1U0 126 aa11.71□□□□□ -0.54
CCDC43-203ENST00000588210 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 OR7C2O60412 319 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 FCN3O75636 299 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 RANP62826 216 aaKnown RBP11.7□□□□□ -0.54
CCDC43-203ENST00000588210 PAX2Q02962 417 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 MEF2CQ06413 473 aaPredicted RBP11.7□□□□□ -0.54
CCDC43-203ENST00000588210 Q0VG73 95 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 OR5I1Q13606 314 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 OR9G1Q8NH87 305 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 CACNG8Q8WXS5 425 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 RNF2Q99496 336 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 MRPL20Q9BYC9 149 aaKnown RBP11.7□□□□□ -0.54
CCDC43-203ENST00000588210 NDUFA4L2Q9NRX3 87 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 INSIG2Q9Y5U4 225 aa11.7□□□□□ -0.54
CCDC43-203ENST00000588210 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 MT-ND6P03923 174 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 C8orf88P0DMB2 117 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 RPL19P84098 196 aaKnown RBP11.69□□□□□ -0.54
CCDC43-203ENST00000588210 TIGITQ495A1 244 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 TMEM177Q53S58 311 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 OR8I2Q8N0Y5 310 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 HARBI1Q96MB7 349 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 ZNF714Q96N38 554 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 ARHGAP32A7KAX9 2087 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 IGHV2-70DA0A0C4DH43 119 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 PSMB11A5LHX3 300 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 H0YJW9 148 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 FCN1O00602 326 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 SERF1AO75920 110 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 LIPFP07098 398 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 NDUFB7P17568 137 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 GATA2P23769 480 aaPredicted RBP11.69□□□□□ -0.54
CCDC43-203ENST00000588210 IER3P46695 156 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 COX19Q49B96 90 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 FAM120AOSQ5T036 256 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 WDR73Q6P4I2 378 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 OR5AN1Q8NGI8 311 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 IGF2BP2-AS1Q96M15 143 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 SLC25A33Q9BSK2 321 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 CDC42EP3Q9UKI2 254 aa11.69□□□□□ -0.54
CCDC43-203ENST00000588210 C22orf46C9J442 243 aa11.68□□□□□ -0.54
CCDC43-203ENST00000588210 ISLRO14498 428 aa11.68□□□□□ -0.54
CCDC43-203ENST00000588210 ENSAO43768 121 aaKnown RBP11.68□□□□□ -0.54
CCDC43-203ENST00000588210 CX3CL1P78423 397 aa11.68□□□□□ -0.54
CCDC43-203ENST00000588210 FAM71F2Q6NXP2 309 aa11.68□□□□□ -0.54
CCDC43-203ENST00000588210 Q6ZWC4 215 aa11.68□□□□□ -0.54
CCDC43-203ENST00000588210 OR10W1Q8NGF6 305 aa11.68□□□□□ -0.54
CCDC43-203ENST00000588210 COMMD5Q9GZQ3 224 aa11.68□□□□□ -0.54
CCDC43-203ENST00000588210 C7orf69Q9H7B7 122 aa11.68□□□□□ -0.54
CCDC43-203ENST00000588210 EREGO14944 169 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 RPL8P62917 257 aaKnown RBP11.67□□□□□ -0.54
CCDC43-203ENST00000588210 ERHP84090 104 aaKnown RBP11.67□□□□□ -0.54
CCDC43-203ENST00000588210 USF2Q15853 346 aaPredicted RBP11.67□□□□□ -0.54
CCDC43-203ENST00000588210 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 OR4A5Q8NH83 315 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 FAM167A-AS1Q96KT0 104 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 TBX15Q96SF7 602 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 MTORP42345 2549 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 A0A1W2PN81 502 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 CRLF1O75462 422 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 FRMD6-AS1P0C7T7 363 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 PAX8Q06710 450 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 TMEM167AQ8TBQ9 72 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 SLC25A2Q9BXI2 301 aa11.67□□□□□ -0.54
CCDC43-203ENST00000588210 RNASE7Q9H1E1 156 aaKnown RBP11.67□□□□□ -0.54
CCDC43-203ENST00000588210 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
CCDC43-203ENST00000588210 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
CCDC43-203ENST00000588210 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
CCDC43-203ENST00000588210 MLANAQ16655 118 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 TEX43Q6ZNM6 134 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 LY6G5BQ8NDX9 201 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 C8orf46Q8TAG6 207 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 H1FXQ92522 213 aaKnown RBP11.66□□□□□ -0.54
CCDC43-203ENST00000588210 AVPP01185 164 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 PPIAL4GP0DN37 164 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 SUMO1P63165 101 aaKnown RBP11.66□□□□□ -0.54
CCDC43-203ENST00000588210 UBE2L3P68036 154 aaKnown RBP11.66□□□□□ -0.54
CCDC43-203ENST00000588210 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 TMEM136Q6ZRR5 245 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 VSTM2AQ8TAG5 236 aa11.66□□□□□ -0.54
CCDC43-203ENST00000588210 ZNF596Q8TC21 504 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms