RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 SRSF12Q8WXF0 261 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 SLC25A15Q9Y619 301 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 KALRNO60229 2985 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 TRBV20OR9-2A0A075B6H5 130 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 HIGD1CA8MV81 97 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 ZNF324O75467 553 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 NMUP48645 174 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 FBLN7Q53RD9 439 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 Q6ZS49 121 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 YPEL4Q96NS1 127 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 ZFP30Q9Y2G7 519 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 YPEL1O60688 119 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 CNTFRP26992 372 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 PRR7Q8TB68 274 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 YPEL2Q96QA6 119 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 ZNF430Q9H8G1 570 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 ISLRO14498 428 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 IGKV3-15P01624 115 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 AREGP15514 252 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 EXOC3-AS1Q8N2X6 119 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 CLEC7AQ9BXN2 247 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 HIVEP3Q5T1R4 2406 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 ZNF785A8K8V0 405 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 CORTO00230 105 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 CCL21O00585 134 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 PROP1O75360 226 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 GPX1P07203 203 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 C22orf34Q6ZV56 151 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 OR4C13Q8NGP0 309 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 CHRDL1Q9BU40 450 aa11.23□□□□□ -0.61
CACNA1A-209ENST00000587525 UPK2O00526 184 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 DLL1O00548 723 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 NBEAP1P0C6P0 100 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 BRWD1-AS2P59051 145 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 AARDQ4LEZ3 155 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 C1orf174Q8IYL3 243 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 FNDC4Q9H6D8 234 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 ORM1P02763 201 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 AMY1AP04745 511 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 VSTM2AQ8TAG5 236 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 Q8TCH9 128 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 PSG1P11464 419 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 PPIFP30405 207 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 SCGB2A2Q13296 93 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 MORN5Q5VZ52 161 aa11.22□□□□□ -0.61
CACNA1A-209ENST00000587525 A0A087X0K7 114 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 TRBV6-6A0A0A6YYG2 114 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 HLA-DQA1P01909 254 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 FAM168AQ92567 244 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 TMEM191AQ9H0A3 160 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 FOXA2Q9Y261 457 aaPredicted RBP11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 TMEM144Q7Z5S9 345 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 LINC00527Q9UJ94 153 aa11.21□□□□□ -0.61
CACNA1A-209ENST00000587525 C17orf100A8MU93 164 aa11.21□□□□□ -0.62
CACNA1A-209ENST00000587525 C10orf142B7Z368 130 aa11.21□□□□□ -0.62
CACNA1A-209ENST00000587525 CSN1S1P47710 185 aa11.21□□□□□ -0.62
CACNA1A-209ENST00000587525 TMEM200BQ69YZ2 307 aa11.21□□□□□ -0.62
CACNA1A-209ENST00000587525 PERPQ96FX8 193 aa11.21□□□□□ -0.62
CACNA1A-209ENST00000587525 IL4P05112 153 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 ZNF883P0CG24 379 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 SLC25A34Q6PIV7 304 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 GP6Q9HCN6 339 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 PLSCR4Q9NRQ2 329 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 CDC42EP3Q9UKI2 254 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 A0A1W2PS18 150 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 K7EQM0 130 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 CCL25O15444 150 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 TIMD4Q96H15 378 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 PPIAL4CA0A0B4J2A2 164 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 C15orf65H3BRN8 121 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 PPIAL4GP0DN37 164 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 PRRX1P54821 245 aa11.2□□□□□ -0.62
CACNA1A-209ENST00000587525 PEX7O00628 323 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 FOXL1Q12952 345 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 C1orf229Q6ZS94 237 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 BPIFA4PQ86YQ2 179 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 Q8NFD4 153 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 C18orf15Q96N68 181 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 MAP1LC3CQ9BXW4 147 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 RPUSD1Q9UJJ7 312 aaKnown RBP11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 LRRK2Q5S007 2527 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 TACC2O95359 2948 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 IGHV1-69-2A0A0G2JMI3 117 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 HIST1H1EP10412 219 aaKnown RBP11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 TSPOP30536 169 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 KLRD1Q13241 179 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 TPTE2P1Q5T6R2 138 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 CIARTQ8N365 385 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 HIGD1AQ9Y241 93 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 UFC1Q9Y3C8 167 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 OR2T8A6NH00 312 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 CD69Q07108 199 aa11.19□□□□□ -0.62
CACNA1A-209ENST00000587525 SRSF7Q16629 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms