RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 MARC2Q969Z3 335 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 TXNDC17Q9BRA2 123 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 RPRMQ9NS64 109 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 RNF114Q9Y508 228 aa9.85□□□□□ -0.83
VMP1-202ENST00000585847 ANKRD34BA5PLL1 514 aa9.84□□□□□ -0.83
VMP1-202ENST00000585847 GNG7O60262 68 aa9.84□□□□□ -0.83
VMP1-202ENST00000585847 IGHG4P01861 327 aa9.84□□□□□ -0.83
VMP1-202ENST00000585847 PPIFP30405 207 aaKnown RBP9.84□□□□□ -0.83
VMP1-202ENST00000585847 CDC34P49427 236 aaPredicted RBP9.84□□□□□ -0.83
VMP1-202ENST00000585847 PSMB3P49720 205 aa9.84□□□□□ -0.83
VMP1-202ENST00000585847 ELLP55199 621 aaPredicted RBP9.84□□□□□ -0.83
VMP1-202ENST00000585847 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
VMP1-202ENST00000585847 RCC1LQ96I51 464 aaKnown RBP9.84□□□□□ -0.83
VMP1-202ENST00000585847 FBXL7Q9UJT9 491 aa9.84□□□□□ -0.83
VMP1-202ENST00000585847 DMRT1Q9Y5R6 373 aa9.84□□□□□ -0.83
VMP1-202ENST00000585847 MGAM2Q2M2H8 2515 aa9.84□□□□□ -0.83
VMP1-202ENST00000585847 MAP1LC3B2A6NCE7 125 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 G3V318 75 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 NUPL2O15504 423 aaKnown RBP9.83□□□□□ -0.84
VMP1-202ENST00000585847 OR2C1O95371 312 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 TOMM40O96008 361 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 IGLV1-40P01703 118 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 ELANEP08246 267 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 LINC00869P0C866 280 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 RAB9AP51151 201 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 RHOGP84095 191 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 RELQ04864 619 aaPredicted RBP9.83□□□□□ -0.84
VMP1-202ENST00000585847 ATP5G2Q06055 141 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 C15orf32Q32M92 178 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 PQLC2Q6ZP29 291 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 COMMD7Q86VX2 200 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 KLHDC1Q8N7A1 406 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 WFDC12Q8WWY7 111 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 MAP1LC3BQ9GZQ8 125 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 MANBALQ9NQG1 85 aa9.83□□□□□ -0.84
VMP1-202ENST00000585847 IGKV1D-37A0A075B6S9 117 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 IGKV1OR2-108A0A075B7D4 117 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 A0A1B0GUS0 222 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 MFSD2BA6NFX1 497 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 KRBOX1C9JBD0 128 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 COX7A2P2O60397 106 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 NDUFB8O95169 186 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 CXorf1O96002 111 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 OR5G3P0C626 314 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 FOXE3Q13461 319 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 KHDC3LQ587J8 217 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 TCTEX1D4Q5JR98 221 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 RPP25LQ8N5L8 163 aaKnown RBP9.82□□□□□ -0.84
VMP1-202ENST00000585847 OR5T1Q8NG75 326 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 OR51G1Q8NGK1 321 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 ZNF502Q8TBZ5 544 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 Q8WTZ3 238 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 SFT2D1Q8WV19 159 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 FUT9Q9Y231 359 aa9.82□□□□□ -0.84
VMP1-202ENST00000585847 OR2J3O76001 311 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 YIF1AO95070 293 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 RD3LP0DJH9 198 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 APELAP0DMC3 54 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 PEA15Q15121 130 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 Q56UQ5 140 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 MIC13Q5XKP0 118 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 TEX38Q6PEX7 206 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 ZNF600Q6ZNG1 722 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 ZNF329Q86UD4 541 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 RAB24Q969Q5 203 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 FAM210AQ96ND0 272 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 TCEAL7Q9BRU2 100 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 HRH4Q9H3N8 390 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 DNAJC4Q9NNZ3 241 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 TMEM167BQ9NRX6 74 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 ZNF355PQ9NSJ1 428 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 TECRQ9NZ01 308 aaKnown RBP9.81□□□□□ -0.84
VMP1-202ENST00000585847 PKD1L1Q8TDX9 2849 aa9.81□□□□□ -0.84
VMP1-202ENST00000585847 HYPMO75409 117 aa9.8□□□□□ -0.84
VMP1-202ENST00000585847 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
VMP1-202ENST00000585847 TRGV3P03979 118 aa9.8□□□□□ -0.84
VMP1-202ENST00000585847 C10orf113Q5VZT2 155 aa9.8□□□□□ -0.84
VMP1-202ENST00000585847 NKX6-2Q9C056 277 aaPredicted RBP9.8□□□□□ -0.84
VMP1-202ENST00000585847 PSMB11A5LHX3 300 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 BMPR1BO00238 502 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 ATP6V1G1O75348 118 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 C8orf88P0DMB2 117 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 CD28P10747 220 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 PSMB8P28062 276 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 FHITP49789 147 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 TPPP2P59282 170 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 KIAA0141Q14154 515 aaPredicted RBP9.79□□□□□ -0.84
VMP1-202ENST00000585847 FAM122CQ6P4D5 195 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 SHISA2Q6UWI4 295 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 C19orf35Q6ZS72 473 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 OR5AU1Q8NGC0 362 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 CITED1Q99966 193 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 ZNF747Q9BV97 191 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 HIGD1AQ9Y241 93 aa9.79□□□□□ -0.84
VMP1-202ENST00000585847 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.78□□□□□ -0.84
VMP1-202ENST00000585847 ADARB2-AS1A8MUL3 147 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms