RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 DYNAPQ8N1N2 210 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 TTC9CQ8N5M4 171 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 OR1B1Q8NGR6 318 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 RASL11BQ9BPW5 248 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 URGCP-MRPS24S4R325 110 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 TGIF2-C20orf24A0A0A6YYL0 155 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 K7EIM0 57 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 IGHV3-48P01763 117 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 HLA-DRB1P01911 266 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 IGLC1P0CG04 106 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 APELAP0DMC3 54 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 PAX1P15863 534 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 HIST1H1BP16401 226 aaKnown RBP8.92□□□□□ -0.98
LIG3-204ENST00000585740 ORM2P19652 201 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 TAS2R60P59551 318 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 CX3CL1P78423 397 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 LINC00305Q7Z4B0 112 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 TMEM68Q96MH6 324 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 RBM14Q96PK6 669 aaKnown RBP8.92□□□□□ -0.98
LIG3-204ENST00000585740 HIGD1AQ9Y241 93 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 CCDC168Q8NDH2 2452 aa8.92□□□□□ -0.98
LIG3-204ENST00000585740 DNHD1Q96M86 4753 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 IGLV11-55A0A075B6I3 123 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 TRAV5A0A0B4J249 113 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 HELTA6NFD8 242 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 TOMM40O96008 361 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 S100A7P31151 101 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 SAA4P35542 130 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 RPL35P42766 123 aaKnown RBP8.91□□□□□ -0.98
LIG3-204ENST00000585740 MFAP4P55083 255 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 Q8N9W7 124 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 OR10G8Q8NGN5 311 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 C2CD4CQ8TF44 421 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 SFRP2Q96HF1 295 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 DERL1Q9BUN8 251 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 SRD5A3Q9H8P0 318 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 RNF24Q9Y225 148 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 DMRT1Q9Y5R6 373 aa8.91□□□□□ -0.98
LIG3-204ENST00000585740 TRAV9-1A0A075B6T8 112 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 IGHV3-21A0A0B4J1V1 117 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 IGHV4-61A0A0C4DH41 118 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 AP4M1O00189 453 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 GGCTO75223 188 aaKnown RBP8.9□□□□□ -0.98
LIG3-204ENST00000585740 S100A9P06702 114 aaKnown RBP8.9□□□□□ -0.98
LIG3-204ENST00000585740 OR10J4P0C629 311 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 RD3LP0DJH9 198 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 PSG1P11464 419 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 COX6B1P14854 86 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 CD24P25063 80 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 CRYBB3P26998 211 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 GNG4P50150 75 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 YPEL3P61236 119 aaPredicted RBP8.9□□□□□ -0.98
LIG3-204ENST00000585740 SUMO1P63165 101 aaKnown RBP8.9□□□□□ -0.98
LIG3-204ENST00000585740 KLK9Q2XQG4 91 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 TIGITQ495A1 244 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 C19orf35Q6ZS72 473 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 OR5T1Q8NG75 326 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 FXYD5Q96DB9 178 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 AJUBAQ96IF1 538 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 TXN2Q99757 166 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 TMEM14CQ9P0S9 112 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 KLK9Q9UKQ9 250 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 MED13LQ71F56 2210 aa8.9□□□□□ -0.98
LIG3-204ENST00000585740 IGHV7-81A0A0B4J1V7 117 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 IGHV1-69DA0A0B4J2H0 117 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 CENPVL3A0A0U1RRI6 287 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 GGTLC3B5MD39 225 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 PPP5D1E7EU14 171 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 UBE2CO00762 179 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 IGHV1-69P01742 117 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 TYMSP04818 313 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 PYYP10082 97 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 SLC25A16P16260 332 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 CNN1P51911 297 aaKnown RBP8.89□□□□□ -0.99
LIG3-204ENST00000585740 LYZP61626 148 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 SNRPEP62304 92 aaKnown RBP8.89□□□□□ -0.99
LIG3-204ENST00000585740 FOXL1Q12952 345 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 SMUG1Q53HV7 270 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 ASPHD1Q5U4P2 390 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 MORN5Q5VZ52 161 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 TEX38Q6PEX7 206 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 OCC1Q8TAD7 63 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 FAM110DQ8TAY7 271 aaPredicted RBP8.89□□□□□ -0.99
LIG3-204ENST00000585740 FAM103A1Q9BTL3 118 aaKnown RBP8.89□□□□□ -0.99
LIG3-204ENST00000585740 ELOVL1Q9BW60 279 aa8.89□□□□□ -0.99
LIG3-204ENST00000585740 TRBV20OR9-2A0A075B6H5 130 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 PEX7O00628 323 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 GNG7O60262 68 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 IGKV1-17P01599 117 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 NBEAP1P0C6P0 100 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 GATA3P23771 443 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 FCGR2BP31994 310 aaPredicted RBP8.88□□□□□ -0.99
LIG3-204ENST00000585740 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
LIG3-204ENST00000585740 RPL19P84098 196 aaKnown RBP8.88□□□□□ -0.99
LIG3-204ENST00000585740 NDPQ00604 133 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 CENPWQ5EE01 88 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 ZNF329Q86UD4 541 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 NECAP1Q8NC96 275 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms