RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 THBDP07204 575 aa11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 HIST1H1EP10412 219 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 LOXP28300 417 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 GNG5P63218 68 aa11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PVRIGQ6DKI7 326 aa11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ASCL5Q7RTU5 278 aa11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PERPQ96FX8 193 aa11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TNFRSF19Q9NS68 423 aa11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 EPDR1Q9UM22 224 aa11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 IGLC7A0M8Q6 106 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 J3KRW8 73 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 LGALS7P47929 136 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 SPATA45Q537H7 98 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 RUSC1-AS1Q66K80 236 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 PRR27Q6MZM9 219 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 ZNF841Q6ZN19 808 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 SMIM12Q96EX1 92 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TMEM208Q9BTX3 173 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 KLF12Q9Y4X4 402 aa11.4□□□□□ -0.59
CDK5RAP3-237ENST00000585163 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 NPSP0C0P6 89 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 ORM2P19652 201 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 UBE2G1P62253 170 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TMEM155Q4W5P6 130 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 RNF24Q9Y225 148 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 OR2J3O76001 311 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 MOSP00540 346 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 SMIM15Q7Z3B0 74 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 OR1B1Q8NGR6 318 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TRGV9Q99603 122 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 KAAG1Q9UBP8 84 aa11.39□□□□□ -0.59
CDK5RAP3-237ENST00000585163 PLXNB1O43157 2135 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 VSTM5A8MXK1 200 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 SLC25A5P05141 298 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 IGHV1-8P0DP01 117 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 NTF3P20783 257 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 HCP5Q6MZN7 132 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 ATP5L2Q7Z4Y8 100 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 BLNKQ8WV28 456 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 BORCS7Q96B45 105 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 MLST8Q9BVC4 326 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 ROS1P08922 2347 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 PGPA6NDG6 321 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 VWC2LB2RUY7 222 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 CORTO00230 105 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TNXAQ16473 311 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 C11orf42Q8N5U0 333 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TEX45Q8NA69 505 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TMEM116Q8NCL8 245 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 GPR82Q96P67 336 aa11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 ALKBH7Q9BT30 221 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-237ENST00000585163 A6NNC1 897 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TMEM238C9JI98 176 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 PRRG2O14669 202 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 NBEAP1P0C6P0 100 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 RNASE6Q93091 150 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 LPAR2Q9HBW0 351 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 ENSAO43768 121 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 IGLC2P0DOY2 106 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 IGLC3P0DOY3 106 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 CA7P43166 264 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 UQCR10Q9UDW1 63 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 CEP250Q9BV73 2442 aa11.37□□□□□ -0.59
CDK5RAP3-237ENST00000585163 HSBP1O75506 76 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 SGK494Q96LW2 274 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 CLEC7AQ9BXN2 247 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 WNT10AQ9GZT5 417 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TMEM133Q9H2Q1 129 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 JKAMPQ9P055 326 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 HYPMO75409 117 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 GP9P14770 177 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 RPL27AP46776 148 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 CAMPP49913 170 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 BATFQ16520 125 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 SSX8Q7RTT4 187 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 LHFPL4Q7Z7J7 247 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 C5orf17Q8NAS9 161 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 PRSS22Q9GZN4 317 aa11.36□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TTC28Q96AY4 2481 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TOMM40O96008 361 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 CRYGBP07316 175 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 GPR6P46095 362 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 PLP1P60201 277 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 BSNQ9UPA5 3926 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 ADGRG4Q8IZF6 3080 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 LTAP01374 205 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 PAX2Q02962 417 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 COL5A1-AS1Q5SY13 56 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 C8orf46Q8TAG6 207 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 FMC1Q96HJ9 113 aa11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 RPP21Q9H633 154 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-237ENST00000585163 KLK10O43240 276 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 FAM87AP0C7U9 286 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms