RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 C12orf45Q8N5I9 185 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 OR5M1Q8NGP8 315 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 OR2AE1Q8NHA4 323 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 KIR2DL5BQ8NHK3 375 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 BLNKQ8WV28 456 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CACNG8Q8WXS5 425 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 LSM10Q969L4 123 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 MRGPRFQ96AM1 343 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 METTL26Q96S19 204 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 PFDN5Q99471 154 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 NRTNQ99748 197 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 PDCD1LG2Q9BQ51 273 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 RNF126Q9BV68 326 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 EMC6Q9BV81 110 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TMED9Q9BVK6 235 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SPANXB1Q9NS25 103 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNRD1Q9P1U0 126 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 KIF26BQ2KJY2 2108 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 NBEAL1Q6ZS30 2694 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CRYBG3Q68DQ2 2970 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SMIM26A0A096LP01 95 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TRAV8-6A0A0B4J262 113 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 LRRN3E7EW58 273 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 H0Y980 276 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TGOLN2O43493 480 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SNAI2O43623 268 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF737O75373 536 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 RCC1P18754 421 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CXCL2P19875 107 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 BLVRBP30043 206 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PFN2P35080 140 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 HAAOP46952 286 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 BAMBIQ13145 260 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 RBMY1FQ15415 496 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 Q1RN00 199 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CDNFQ49AH0 187 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 OR2T2Q6IF00 324 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TBPL2Q6SJ96 375 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF833PQ6ZTB9 187 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 LINC00173Q6ZV60 143 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 MRPL52Q86TS9 123 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF101Q8IZC7 436 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 DRAM1Q8N682 238 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 OR10J5Q8NHC4 309 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM106AQ96A25 262 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SMIM8Q96KF7 97 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CMSS1Q9BQ75 279 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 GINS3Q9BRX5 216 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PDCD10Q9BUL8 212 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 RBFOX1Q9NWB1 397 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 RHBDL2Q9NX52 303 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 BET1LQ9NYM9 111 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 C14orf166Q9Y224 244 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PUS1Q9Y606 427 aaKnown RBP eCLIP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 MXRA5Q9NR99 2828 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TRBV7-1A0A0A6YYK4 115 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM183AA6NL82 134 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 C3orf84H3BNL1 204 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 OR2A4O95047 310 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 NDUFA3O95167 84 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 NAPSAO96009 420 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 IFNA6P05013 189 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SOD3P08294 240 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CGB3P0DN86 165 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CGB7P0DN87 165 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PSG2P11465 335 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 HIST1H1DP16402 221 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CTRB1P17538 263 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PRSS3P35030 304 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SSTR5P35346 364 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 INPP1P49441 399 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 UBA52P62987 128 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 RPL18AQ02543 176 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PMVKQ15126 192 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CTRB2Q6GPI1 263 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF645Q8N7E2 425 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 KLHL30-AS1Q8NEE0 82 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 C17orf50Q8WW18 174 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CHCHD10Q8WYQ3 142 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 DGCR14Q96DF8 476 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM101Q96IK0 257 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 OR2A7Q96R45 310 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TRAPPC2LQ9UL33 140 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TSSC4Q9Y5U2 329 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 KLLNB2CW77 178 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 K7EMT4 169 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 LGALS9O00182 355 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 INSP01308 110 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 MT-ND4P03905 459 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CTSDP07339 412 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 GALR1P47211 349 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 FMODQ06828 376 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PRSS8Q16651 343 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM183BQ1AE95 376 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 C15orf32Q32M92 178 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 AKIRIN2Q53H80 203 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SMUG1Q53HV7 270 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 UTF1Q5T230 341 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 Q6P435 159 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 GLIPR1L1Q6UWM5 242 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms