RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 UTP11Q9Y3A2 253 aaKnown RBP0.17□□□□□ -2.38
SKA2-210ENST00000584089 CHCHD2Q9Y6H1 151 aaPredicted RBP0.17□□□□□ -2.38
SKA2-210ENST00000584089 TNS3Q68CZ2 1445 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 IGHV1-58A0A0C4DH39 117 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 FAM236DA0A1B0GTK5 79 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 TLCD2A6NGC4 264 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 CLDN24A6NM45 220 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 NUPR1O60356 82 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 FAM236CP0DP71 79 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 OR6V1Q8N148 313 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 CLDN22Q8N7P3 220 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 ST6GALNAC3Q8NDV1 305 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 TMEM254Q8TBM7 123 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 CMSS1Q9BQ75 279 aaKnown RBP0.16□□□□□ -2.38
SKA2-210ENST00000584089 PLXNA4Q9HCM2 1894 aa0.16□□□□□ -2.38
SKA2-210ENST00000584089 UNC13CQ8NB66 2214 aa0.15□□□□□ -2.38
SKA2-210ENST00000584089 MYH7BA7E2Y1 1941 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 ZDBF2Q9HCK1 2354 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 TCRBV4S1A1TA0A5B7 111 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 KLF7O75840 302 aaPredicted RBP0.15□□□□□ -2.39
SKA2-210ENST00000584089 AP3S2P59780 193 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 CIRBPQ14011 172 aaKnown RBP0.15□□□□□ -2.39
SKA2-210ENST00000584089 IAH1Q2TAA2 248 aaPredicted RBP0.15□□□□□ -2.39
SKA2-210ENST00000584089 SPINK9Q5DT21 86 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 OR11H6Q8NGC7 330 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 DDI1Q8WTU0 396 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 CT55Q8WUE5 264 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 BORCS7Q96B45 105 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 RNF122Q9H9V4 155 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 PLAC8Q9NZF1 115 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 NOSIPQ9Y314 301 aaKnown RBP0.15□□□□□ -2.39
SKA2-210ENST00000584089 RIMBP3CA6NJZ7 1639 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 RIMBP3BA6NNM3 1639 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 RIMBP3Q9UFD9 1639 aa0.15□□□□□ -2.39
SKA2-210ENST00000584089 ARHGEF28Q8N1W1 1705 aaKnown RBP0.15□□□□□ -2.39
SKA2-210ENST00000584089 KDM6AO15550 1401 aaPredicted RBP0.14□□□□□ -2.39
SKA2-210ENST00000584089 J3QRK9 145 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 GADD45GO95257 159 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 CNIH1O95406 144 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 IGLV3-1P01715 115 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 RHOBP62745 196 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 C12orf74Q32Q52 190 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 KRTAP26-1Q6PEX3 210 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 GDPD1Q8N9F7 314 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 SLAMF6Q96DU3 332 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 GPER1Q99527 375 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 C14orf105Q9NVL8 296 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 ORMDL1Q9P0S3 153 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 OBSL1O75147 1896 aa0.14□□□□□ -2.39
SKA2-210ENST00000584089 IGLV3-32A0A0A0MS00 114 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 A0A0D9SG42 100 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 hADV38S2A0JD32 116 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 C1orf196B1AJZ1 125 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 PPIBP23284 216 aaKnown RBP0.13□□□□□ -2.39
SKA2-210ENST00000584089 IMPG1Q17R60 797 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 C2orf82Q6UX34 121 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 Q8IYB0 196 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 SLC30A7Q8NEW0 376 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 OR2T35Q8NGX2 323 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 LINC00052Q96N35 136 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 PRADC1Q9BSG0 188 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 TAS2R7Q9NYW3 318 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 TNFSF18Q9UNG2 199 aa0.13□□□□□ -2.39
SKA2-210ENST00000584089 PHRF1Q9P1Y6 1649 aaKnown RBP0.13□□□□□ -2.39
SKA2-210ENST00000584089 MUC4Q99102 2169 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 hCG_1818297A0A087WSY0 165 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 SMIM23A6NLE4 172 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 A8MT66 165 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 CYB5BO43169 146 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 DYNLT1P63172 113 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 HAGHLQ6PII5 290 aaPredicted RBP0.12□□□□□ -2.39
SKA2-210ENST00000584089 FAM172AQ8WUF8 416 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 TP53RKQ96S44 253 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 LINC00467Q9BRT7 94 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 TMEM133Q9H2Q1 129 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 FBXO5Q9UKT4 447 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 BDP1A6H8Y1 2624 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 SCN8AQ9UQD0 1980 aa0.12□□□□□ -2.39
SKA2-210ENST00000584089 KPNA3O00505 521 aaPredicted RBP0.11□□□□□ -2.39
SKA2-210ENST00000584089 SERPINE1P05121 402 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 KRTAP2-3P0C7H8 128 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 SMIM17P0DL12 118 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 RNASE4P34096 147 aaKnown RBP0.11□□□□□ -2.39
SKA2-210ENST00000584089 OMPP47874 163 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 Q6Q795 121 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 KRTAP2-4Q9BYR9 128 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 KRTAP2-1Q9BYU5 128 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 TVP23BQ9NYZ1 205 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 IDI2-AS1Q9NZ38 188 aa0.11□□□□□ -2.39
SKA2-210ENST00000584089 SIP14410 1827 aa0.1□□□□□ -2.39
SKA2-210ENST00000584089 TIMM17BO60830 172 aa0.1□□□□□ -2.39
SKA2-210ENST00000584089 C8GP07360 202 aa0.1□□□□□ -2.39
SKA2-210ENST00000584089 HOXA6P31267 233 aa0.1□□□□□ -2.39
SKA2-210ENST00000584089 ZNF833PQ6ZTB9 187 aa0.1□□□□□ -2.39
SKA2-210ENST00000584089 GRINAQ7Z429 371 aa0.1□□□□□ -2.39
SKA2-210ENST00000584089 MUC5ACP98088 5654 aa0.1□□□□□ -2.39
SKA2-210ENST00000584089 RTL1A6NKG5 1358 aa0.09□□□□□ -2.39
SKA2-210ENST00000584089 TNCP24821 2201 aa0.09□□□□□ -2.39
SKA2-210ENST00000584089 A0A087WUJ7 227 aa0.09□□□□□ -2.4
SKA2-210ENST00000584089 K7EIL1 84 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms