RNA–Protein interactions for RNA: ENST00000582352.1

SHMT1-208, Transcript of serine hydroxymethyltransferase 1, humanhuman

Gene SHMT1, Length 2,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-208ENST00000582352 KLF12Q9Y4X4 402 aa9.83□□□□□ -0.84
SHMT1-208ENST00000582352 SLC25A17O43808 307 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 TOMM40O96008 361 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 TNFRSF1AP19438 455 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 PCP4P48539 62 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 CT83Q5H943 113 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 ZCCHC24Q8N2G6 241 aaKnown RBP9.82□□□□□ -0.84
SHMT1-208ENST00000582352 MUC15Q8N387 334 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 RPRMLQ8N4K4 120 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 C5orf17Q8NAS9 161 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 H1FXQ92522 213 aaKnown RBP9.82□□□□□ -0.84
SHMT1-208ENST00000582352 DAZAP1Q96EP5 407 aaKnown RBP9.82□□□□□ -0.84
SHMT1-208ENST00000582352 COLQQ9Y215 455 aaPredicted RBP9.82□□□□□ -0.84
SHMT1-208ENST00000582352 A0A1W2PPI3 338 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 IGLC7A0M8Q6 106 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 SH2D7A6NKC9 451 aaPredicted RBP9.82□□□□□ -0.84
SHMT1-208ENST00000582352 M0QZ24 198 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 NBEAP1P0C6P0 100 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 UBE2V1Q13404 147 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 DEFB109BQ30KR1 87 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 FAM71F2Q6NXP2 309 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 SPATA12Q7Z6I5 190 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 TMEM186Q96B77 213 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 CHCHD1Q96BP2 118 aaKnown RBP9.82□□□□□ -0.84
SHMT1-208ENST00000582352 URB1-AS1Q96HZ7 61 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 PGLYRP4Q96LB8 373 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 FAM215AQ9Y5M1 114 aa9.82□□□□□ -0.84
SHMT1-208ENST00000582352 IGHV1-24A0A0C4DH33 117 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 IGLV2-23P01705 113 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 CD40P25942 277 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 DIAPH2-AS1Q14236 149 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 ST20Q9HBF5 79 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 CFAP47Q6ZTR5 3102 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 C22orf46C9J442 243 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 LEPROTL1O95214 131 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 LTAP01374 205 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 FAM120AOSQ5T036 256 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 TMEM200BQ69YZ2 307 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 ZADH2Q8N4Q0 377 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 GTSF1Q8WW33 167 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 ST6GALNAC6Q969X2 333 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 MLST8Q9BVC4 326 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 TPSG1Q9NRR2 321 aa9.81□□□□□ -0.84
SHMT1-208ENST00000582352 SYS1-DBNDD2H3BUS1 97 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 CHEK1O14757 476 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 CRXO43186 299 aaPredicted RBP9.8□□□□□ -0.84
SHMT1-208ENST00000582352 HCP5Q6MZN7 132 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 LINC00322Q6ZN03 302 aaPredicted RBP9.8□□□□□ -0.84
SHMT1-208ENST00000582352 RBPMS2Q6ZRY4 209 aaKnown RBP9.8□□□□□ -0.84
SHMT1-208ENST00000582352 LHFPL4Q7Z7J7 247 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 PRSS22Q9GZN4 317 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 ZNF492Q9P255 531 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 CD24P25063 80 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 ZNF137PP52743 207 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 C1orf185Q5T7R7 199 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 TRGV9Q99603 122 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 GFRA4Q9GZZ7 299 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 Q9H3A6 140 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 H3BTX0 84 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 TCRAP04437 139 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 GP9P14770 177 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 C1RLQ9NZP8 487 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 ZNF835Q9Y2P0 537 aa9.8□□□□□ -0.84
SHMT1-208ENST00000582352 RP1L1Q8IWN7 2480 aaPredicted RBP9.79□□□□□ -0.84
SHMT1-208ENST00000582352 BOD1L1Q8NFC6 3051 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 C19orf71A6NCJ1 209 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 M0R296 226 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 ENSAO43768 121 aaKnown RBP9.79□□□□□ -0.84
SHMT1-208ENST00000582352 FAM27E3Q08E93 113 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 FBLN7Q53RD9 439 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 FAM87AP0C7U9 286 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 NUP37Q8NFH4 326 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 OR4C5Q8NGB2 326 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
SHMT1-208ENST00000582352 PLXNB1O43157 2135 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 LOC102724200A0A096LPH7 203 aaPredicted RBP9.78□□□□□ -0.84
SHMT1-208ENST00000582352 NDUFB3O43676 98 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 LIPFP07098 398 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 CRYGCP07315 174 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 COL8A1P27658 744 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 MC5RP33032 325 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 LRRC10Q5BKY1 277 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 RUSC1-AS1Q66K80 236 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 TMEM108Q6UXF1 575 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 C22orf34Q6ZV56 151 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 LINC00173Q6ZV60 143 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 LINC00311Q8N616 119 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 RNASE8Q8TDE3 154 aaKnown RBP9.78□□□□□ -0.84
SHMT1-208ENST00000582352 PPIAL4EA0A075B759 164 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 IGHV3-21A0A0B4J1V1 117 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 IGHV2-70DA0A0C4DH43 119 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 hDV102S1A0JD36 115 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 C17orf100A8MU93 164 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 PPIAL4DF5H284 164 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 APELAP0DMC3 54 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 PPIAL4FP0DN26 164 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 MPV17L2Q567V2 206 aa9.78□□□□□ -0.84
SHMT1-208ENST00000582352 SLC25A34Q6PIV7 304 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms