RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 NPCDR1Q9BY65 106 aa7.3□□□□□ -1.24
RFFL-210ENST00000582308 ARV1Q9H2C2 271 aa7.3□□□□□ -1.24
RFFL-210ENST00000582308 PUS1Q9Y606 427 aaKnown RBP eCLIP7.3□□□□□ -1.24
RFFL-210ENST00000582308 NOTCH3Q9UM47 2321 aa7.3□□□□□ -1.24
RFFL-210ENST00000582308 TRRAPQ9Y4A5 3859 aa7.3□□□□□ -1.24
RFFL-210ENST00000582308 IGHV3OR16-8A0A075B7F1 116 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 BORCS7-ASMTA0A0B4J1R7 106 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 WI2-2373I1.2A0A1W2PRP0 233 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 NDUFA4O00483 81 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 SCGB2A1O75556 95 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 JTBO76095 146 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 ATP6V0CP27449 155 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 MYCNOSP40205 109 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 SYNJ2BPP57105 145 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 SELENOTP62341 195 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 RELQ04864 619 aaPredicted RBP7.29□□□□□ -1.24
RFFL-210ENST00000582308 ZNF266Q14584 549 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 MIC13Q5XKP0 118 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 TOMM20LQ6UXN7 152 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 UNQ9165/PRO28630Q6UXU0 137 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 HSD17B11Q8NBQ5 300 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 BPIFCQ8NFQ6 507 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 Q8WTZ3 238 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 DLX4Q92988 240 aaPredicted RBP7.29□□□□□ -1.24
RFFL-210ENST00000582308 PPP1R14BQ96C90 147 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 RSG1Q9BU20 258 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 ZFAND3Q9H8U3 227 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 PKD1L1Q8TDX9 2849 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 CMYA5Q8N3K9 4069 aa7.29□□□□□ -1.24
RFFL-210ENST00000582308 YIF1AO95070 293 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 TSPAN15O95858 294 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 FABP1P07148 127 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 RPL29P47914 159 aaKnown RBP7.28□□□□□ -1.24
RFFL-210ENST00000582308 PRR20EP86478 221 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 PRR20CP86479 221 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 PRR20DP86480 221 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 PRR20BP86481 221 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 PRR20AP86496 221 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 FAM106AQ4KMX7 169 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 STPG3Q8N7X2 389 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 ZNF709Q8N972 641 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 OR4F17Q8NGA8 305 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 OR51G1Q8NGK1 321 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 TMEM190Q8WZ59 177 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 OR4F4Q96R69 305 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 GINS3Q9BRX5 216 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 ZNF471Q9BX82 626 aaPredicted RBP7.28□□□□□ -1.24
RFFL-210ENST00000582308 SH3BGRL3Q9H299 93 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 PXMP4Q9Y6I8 212 aa7.28□□□□□ -1.24
RFFL-210ENST00000582308 ZNF320A2RRD8 509 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 LGALS9O00182 355 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 ZNF207O43670 478 aaKnown RBP7.27□□□□□ -1.25
RFFL-210ENST00000582308 IL4P05112 153 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 PLP1P60201 277 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 LYZP61626 148 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 USF2Q15853 346 aaPredicted RBP7.27□□□□□ -1.25
RFFL-210ENST00000582308 TM4SF20Q53R12 229 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 REC114Q7Z4M0 266 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 C1QL4Q86Z23 238 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 LINC00482Q8N8I6 264 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 SPATA3Q8NHX4 192 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 STOML3Q8TAV4 291 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 RNF125Q96EQ8 232 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 C20orf24Q9BUV8 137 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 SLC39A9Q9NUM3 307 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 TIMM9Q9Y5J7 89 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 SORL1Q92673 2214 aa7.27□□□□□ -1.25
RFFL-210ENST00000582308 TMEM213A2RRL7 107 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 C17orf112F2Z3M2 114 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 M0QZ24 198 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 CFDP00746 253 aaPredicted RBP7.26□□□□□ -1.25
RFFL-210ENST00000582308 PF4P02776 101 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 SPP1P10451 314 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 ORM2P19652 201 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 EDN2P20800 178 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 C4BPBP20851 252 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 B2MP61769 119 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 GCSAMLQ5JQS6 135 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 FFAR4Q5NUL3 377 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 PATE2Q6UY27 113 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 IL34Q6ZMJ4 242 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 ADAMTSL5Q6ZMM2 481 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 SLC51BQ86UW2 128 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 OR1B1Q8NGR6 318 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 GNPNAT1Q96EK6 184 aaPredicted RBP7.26□□□□□ -1.25
RFFL-210ENST00000582308 PSMG3Q9BT73 122 aaPredicted RBP7.26□□□□□ -1.25
RFFL-210ENST00000582308 PBDC1Q9BVG4 233 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 SLC25A32Q9H2D1 315 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 PLA2G2EQ9NZK7 142 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 MRPL27Q9P0M9 148 aaKnown RBP7.26□□□□□ -1.25
RFFL-210ENST00000582308 DOK5Q9P104 306 aa7.26□□□□□ -1.25
RFFL-210ENST00000582308 IGHV3-49A0A0A0MS15 119 aa7.25□□□□□ -1.25
RFFL-210ENST00000582308 C2orf70A6NJV1 201 aa7.25□□□□□ -1.25
RFFL-210ENST00000582308 A8MWP6 167 aa7.25□□□□□ -1.25
RFFL-210ENST00000582308 K7EMT4 169 aa7.25□□□□□ -1.25
RFFL-210ENST00000582308 OVOL1O14753 267 aa7.25□□□□□ -1.25
RFFL-210ENST00000582308 HYPMO75409 117 aa7.25□□□□□ -1.25
RFFL-210ENST00000582308 APOHP02749 345 aaPredicted RBP7.25□□□□□ -1.25
RFFL-210ENST00000582308 CSN3P07498 182 aa7.25□□□□□ -1.25
RFFL-210ENST00000582308 TPT1P13693 172 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms