RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HELTA6NFD8 242 aa14.37□□□□□ -0.11
SREBF1-220ENST00000581707 K7EQG2 157 aa14.37□□□□□ -0.11
SREBF1-220ENST00000581707 PLA2G10O15496 165 aa14.37□□□□□ -0.11
SREBF1-220ENST00000581707 IFNA21P01568 189 aa14.37□□□□□ -0.11
SREBF1-220ENST00000581707 LEMD1Q68G75 181 aa14.37□□□□□ -0.11
SREBF1-220ENST00000581707 OR51G1Q8NGK1 321 aa14.37□□□□□ -0.11
SREBF1-220ENST00000581707 GLMPQ8WWB7 406 aa14.37□□□□□ -0.11
SREBF1-220ENST00000581707 RNF183Q96D59 192 aa14.37□□□□□ -0.11
SREBF1-220ENST00000581707 IGKV1D-37A0A075B6S9 117 aa14.36□□□□□ -0.11
SREBF1-220ENST00000581707 MPTX1A8MV57 137 aa14.36□□□□□ -0.11
SREBF1-220ENST00000581707 AP2S1P53680 142 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-220ENST00000581707 ID3Q02535 119 aa14.36□□□□□ -0.11
SREBF1-220ENST00000581707 LYRM1O43325 122 aa14.35□□□□□ -0.11
SREBF1-220ENST00000581707 FABP1P07148 127 aa14.35□□□□□ -0.11
SREBF1-220ENST00000581707 ZNF90Q03938 601 aa14.35□□□□□ -0.11
SREBF1-220ENST00000581707 SPANXN5Q5MJ07 72 aa14.35□□□□□ -0.11
SREBF1-220ENST00000581707 DCANP1Q8TF63 244 aa14.35□□□□□ -0.11
SREBF1-220ENST00000581707 RNF125Q96EQ8 232 aa14.35□□□□□ -0.11
SREBF1-220ENST00000581707 BUB3O43684 328 aa14.34□□□□□ -0.11
SREBF1-220ENST00000581707 PBDC1Q9BVG4 233 aa14.34□□□□□ -0.11
SREBF1-220ENST00000581707 PFDN2Q9UHV9 154 aa14.34□□□□□ -0.11
SREBF1-220ENST00000581707 STRAPQ9Y3F4 350 aaKnown RBP14.34□□□□□ -0.11
SREBF1-220ENST00000581707 A0A0J9YWU9 116 aa14.33□□□□□ -0.12
SREBF1-220ENST00000581707 H3BP45 60 aa14.33□□□□□ -0.12
SREBF1-220ENST00000581707 ZNF688P0C7X2 276 aa14.33□□□□□ -0.12
SREBF1-220ENST00000581707 NKX2-1P43699 371 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-220ENST00000581707 POLR2GP62487 172 aaKnown RBP eCLIP14.33□□□□□ -0.12
SREBF1-220ENST00000581707 OR8G2PQ6IF36 304 aa14.33□□□□□ -0.12
SREBF1-220ENST00000581707 STHQ8IWL8 128 aa14.33□□□□□ -0.12
SREBF1-220ENST00000581707 OR4D5Q8NGN0 318 aa14.33□□□□□ -0.12
SREBF1-220ENST00000581707 TRGV9Q99603 122 aa14.33□□□□□ -0.12
SREBF1-220ENST00000581707 C20orf85Q9H1P6 137 aa14.33□□□□□ -0.12
SREBF1-220ENST00000581707 AGRNO00468 2067 aa14.32□□□□□ -0.12
SREBF1-220ENST00000581707 SNRPGP15A8MWD9 76 aa14.32□□□□□ -0.12
SREBF1-220ENST00000581707 PRSS46E5RG02 174 aa14.32□□□□□ -0.12
SREBF1-220ENST00000581707 NUP62P37198 522 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-220ENST00000581707 OR2F1Q13607 317 aa14.32□□□□□ -0.12
SREBF1-220ENST00000581707 SIGLEC15Q6ZMC9 328 aa14.32□□□□□ -0.12
SREBF1-220ENST00000581707 THAP8Q8NA92 274 aa14.32□□□□□ -0.12
SREBF1-220ENST00000581707 MITD1Q8WV92 249 aa14.32□□□□□ -0.12
SREBF1-220ENST00000581707 CCDC32Q9BV29 185 aa14.32□□□□□ -0.12
SREBF1-220ENST00000581707 IGKV1OR2-108A0A075B7D4 117 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 TCRBP04435 133 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 LYZP61626 148 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 IAH1Q2TAA2 248 aaPredicted RBP14.31□□□□□ -0.12
SREBF1-220ENST00000581707 LINC00299Q6ZSB3 139 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 GATAD1Q8WUU5 269 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 NRN1Q9NPD7 142 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 PSENENQ9NZ42 101 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 STARD9Q9P2P6 4700 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 RYR3Q15413 4870 aa14.31□□□□□ -0.12
SREBF1-220ENST00000581707 SSSCA1O60232 199 aa14.3□□□□□ -0.12
SREBF1-220ENST00000581707 CA1P00915 261 aaPredicted RBP14.3□□□□□ -0.12
SREBF1-220ENST00000581707 SMIM8Q96KF7 97 aa14.3□□□□□ -0.12
SREBF1-220ENST00000581707 DYNC2H1Q8NCM8 4307 aaKnown RBP14.29□□□□□ -0.12
SREBF1-220ENST00000581707 TRAV6A0A075B6T7 132 aa14.29□□□□□ -0.12
SREBF1-220ENST00000581707 LCE6AA0A183 80 aa14.29□□□□□ -0.12
SREBF1-220ENST00000581707 KNCNA6PVL3 124 aa14.29□□□□□ -0.12
SREBF1-220ENST00000581707 SNRPD3P62318 126 aaKnown RBP14.29□□□□□ -0.12
SREBF1-220ENST00000581707 PSMG4Q5JS54 123 aa14.29□□□□□ -0.12
SREBF1-220ENST00000581707 ZBTB8BQ8NAP8 495 aaPredicted RBP14.29□□□□□ -0.12
SREBF1-220ENST00000581707 RARRES2Q99969 163 aa14.29□□□□□ -0.12
SREBF1-220ENST00000581707 GSKIPQ9P0R6 139 aa14.29□□□□□ -0.12
SREBF1-220ENST00000581707 SCGB1D2O95969 90 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 CFDP00746 253 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-220ENST00000581707 EWSR1Q01844 656 aaKnown RBP eCLIP14.28□□□□□ -0.12
SREBF1-220ENST00000581707 AKR1C1Q04828 323 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 ACTL10Q5JWF8 245 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 C1orf194Q5T5A4 169 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 ACOT7LQ6ZUV0 252 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 TRPT1Q86TN4 253 aaKnown RBP14.28□□□□□ -0.12
SREBF1-220ENST00000581707 S100ZQ8WXG8 99 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 PPP1R14BQ96C90 147 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 RAB40CQ96S21 281 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 SEPSECSQ9HD40 501 aaKnown RBP14.28□□□□□ -0.12
SREBF1-220ENST00000581707 NUDT15Q9NV35 164 aa14.28□□□□□ -0.12
SREBF1-220ENST00000581707 A6NHS1 94 aa14.27□□□□□ -0.13
SREBF1-220ENST00000581707 PAX9P55771 341 aa14.27□□□□□ -0.13
SREBF1-220ENST00000581707 TMEM217Q8N7C4 229 aa14.27□□□□□ -0.13
SREBF1-220ENST00000581707 OR11H2Q8NH07 326 aa14.27□□□□□ -0.13
SREBF1-220ENST00000581707 FBXL17Q9UF56 701 aa14.27□□□□□ -0.13
SREBF1-220ENST00000581707 ATF4P18848 351 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-220ENST00000581707 MORN3Q6PF18 240 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-220ENST00000581707 TMEM144Q7Z5S9 345 aa14.26□□□□□ -0.13
SREBF1-220ENST00000581707 BPIFCQ8NFQ6 507 aa14.26□□□□□ -0.13
SREBF1-220ENST00000581707 ZNF431Q8TF32 576 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-220ENST00000581707 FAM240BA0A1B0GVZ2 78 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 SMCO3A2RU48 225 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 PMS2P5A8MQ11 134 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 H2AFB2P0C5Z0 115 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 SPP1P10451 314 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 GATA2P23769 480 aaPredicted RBP14.25□□□□□ -0.13
SREBF1-220ENST00000581707 ZNF846Q147U1 533 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 MZT2BQ6NZ67 158 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 TMEM14EPQ6UXP3 125 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 OR8I2Q8N0Y5 310 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 LYSTQ99698 3801 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 SEC22CQ9BRL7 303 aa14.25□□□□□ -0.13
SREBF1-220ENST00000581707 CXorf65A6NEN9 183 aa14.24□□□□□ -0.13
SREBF1-220ENST00000581707 CCSO14618 274 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms