RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 HNRNPCP07910 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNORD55-201ENST00000581525 DEFA1P59665 94 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 DEFA3P59666 94 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 ZNF90Q03938 601 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 USF2Q15853 346 aaPredicted RBP9.39□□□□□ -0.91
SNORD55-201ENST00000581525 OR8G2PQ6IF36 304 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 TCF24Q7RTU0 167 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 TMEM144Q7Z5S9 345 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 GLMPQ8WWB7 406 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 GPN1Q9HCN4 374 aaPredicted RBP9.39□□□□□ -0.91
SNORD55-201ENST00000581525 GSKIPQ9P0R6 139 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 TENM3Q9P273 2699 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 IGHV3-49A0A0A0MS15 119 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 K7EPK0 472 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 CCSO14618 274 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 SSSCA1O60232 199 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 IL4P05112 153 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 DLK1P80370 383 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 GGACTQ9BVM4 153 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 WFDC10AQ9H1F0 79 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 SLC45A2Q9UMX9 530 aa9.38□□□□□ -0.91
SNORD55-201ENST00000581525 IGHV3OR16-13A0A075B7E8 117 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 IGHV3-74A0A0B4J1X5 117 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 ZFP92A6NM28 416 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 DEDDO75618 318 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 FABP1P07148 127 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 P2RY1P47900 373 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 AP2S1P53680 142 aaPredicted RBP9.37□□□□□ -0.91
SNORD55-201ENST00000581525 PAFAH1B2P68402 229 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 GSG1LQ6UXU4 331 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 GRAMD2BQ96HH9 432 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 MS4A6AQ9H2W1 248 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 ZMAT4Q9H898 229 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 NPVFQ9HCQ7 196 aa9.37□□□□□ -0.91
SNORD55-201ENST00000581525 SEPSECSQ9HD40 501 aaKnown RBP9.37□□□□□ -0.91
SNORD55-201ENST00000581525 C5orf51A6NDU8 294 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 H3BP45 60 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 K7EQG2 157 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 EIF2B2P49770 351 aaKnown RBP9.36□□□□□ -0.91
SNORD55-201ENST00000581525 PLP1P60201 277 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 ACOT7LQ6ZUV0 252 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 STPG3Q8N7X2 389 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 OR10P1Q8NGE3 313 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 NARS2Q96I59 477 aaKnown RBP9.36□□□□□ -0.91
SNORD55-201ENST00000581525 SPATA25Q9BR10 227 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 RABAC1Q9UI14 185 aa9.36□□□□□ -0.91
SNORD55-201ENST00000581525 IGHV3-66A0A0C4DH42 116 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 KIR2DL5BA0A0G2JN68 375 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 KIR2DL5BA0A0G2JPC4 375 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 HELTA6NFD8 242 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 CCNKO75909 580 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 METTL15P1P0C7V9 234 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 NUP62P37198 522 aaPredicted RBP9.35□□□□□ -0.91
SNORD55-201ENST00000581525 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
SNORD55-201ENST00000581525 KIR2DL5AQ8N109 375 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 KIR2DL5BQ8NHK3 375 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 NMES1Q9C002 83 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 PFDN2Q9UHV9 154 aa9.35□□□□□ -0.91
SNORD55-201ENST00000581525 LOC102724200A0A096LPH7 203 aaPredicted RBP9.34□□□□□ -0.91
SNORD55-201ENST00000581525 FAM25EA8MYX2 175 aa9.34□□□□□ -0.91
SNORD55-201ENST00000581525 UBE2CO00762 179 aa9.34□□□□□ -0.91
SNORD55-201ENST00000581525 SCGB1D2O95969 90 aa9.34□□□□□ -0.91
SNORD55-201ENST00000581525 SELENOTP62341 195 aa9.34□□□□□ -0.91
SNORD55-201ENST00000581525 CYCSP99999 105 aaKnown RBP9.34□□□□□ -0.91
SNORD55-201ENST00000581525 RAB32Q13637 225 aa9.34□□□□□ -0.91
SNORD55-201ENST00000581525 GGTLC1Q9BX51 225 aa9.34□□□□□ -0.91
SNORD55-201ENST00000581525 MAP6D1Q9H9H5 199 aa9.34□□□□□ -0.91
SNORD55-201ENST00000581525 LYRM2Q9NU23 88 aaPredicted RBP9.34□□□□□ -0.91
SNORD55-201ENST00000581525 PAIP2BQ9ULR5 123 aaKnown RBP9.34□□□□□ -0.91
SNORD55-201ENST00000581525 DNASE2O00115 360 aaPredicted RBP9.33□□□□□ -0.92
SNORD55-201ENST00000581525 PTTG1O95997 202 aa9.33□□□□□ -0.92
SNORD55-201ENST00000581525 VWC2Q2TAL6 325 aa9.33□□□□□ -0.92
SNORD55-201ENST00000581525 WFDC3Q8IUB2 231 aa9.33□□□□□ -0.92
SNORD55-201ENST00000581525 GBGT1Q8N5D6 347 aa9.33□□□□□ -0.92
SNORD55-201ENST00000581525 BPIFCQ8NFQ6 507 aa9.33□□□□□ -0.92
SNORD55-201ENST00000581525 CHAC2Q8WUX2 184 aa9.33□□□□□ -0.92
SNORD55-201ENST00000581525 UBQLN2Q9UHD9 624 aa9.33□□□□□ -0.92
SNORD55-201ENST00000581525 TP53TG1Q9Y2A0 90 aa9.33□□□□□ -0.92
SNORD55-201ENST00000581525 L7N2F9 121 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 PVALBP20472 110 aaPredicted RBP9.32□□□□□ -0.92
SNORD55-201ENST00000581525 H2BFSP57053 126 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 VAMP2P63027 116 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 TEPPQ6URK8 271 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 SIGLEC15Q6ZMC9 328 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 CYP2G1PQ6ZSU1 146 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 Q6ZWC4 215 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 FAM24BQ8N5W8 94 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 TMEM252Q8N6L7 170 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 EDA2RQ9HAV5 297 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 NRN1Q9NPD7 142 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 FBXL17Q9UF56 701 aa9.32□□□□□ -0.92
SNORD55-201ENST00000581525 LSM5Q9Y4Y9 91 aaKnown RBP9.32□□□□□ -0.92
SNORD55-201ENST00000581525 FAM24AA6NFZ4 105 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms