RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SOCS3O14543 225 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 ATG12O94817 140 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 DEFB130BP0DP73 79 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 DEFB130AP0DP74 79 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 ID1P41134 155 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 ALDH3B2P48448 385 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 PSMB3P49720 205 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 SPCS3P61009 180 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 TRIM16LQ309B1 348 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 C2orf83Q53S99 150 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 COQ8AQ8NI60 647 aa13.37□□□□□ -0.27
NDEL1-209ENST00000580738 RNASEH2CQ8TDP1 164 aaKnown RBP13.37□□□□□ -0.27
NDEL1-209ENST00000580738 RRNAD1Q96FB5 475 aaKnown RBP13.37□□□□□ -0.27
NDEL1-209ENST00000580738 F5H768 121 aa13.36□□□□□ -0.27
NDEL1-209ENST00000580738 RCVRNP35243 200 aa13.36□□□□□ -0.27
NDEL1-209ENST00000580738 PAX9P55771 341 aa13.36□□□□□ -0.27
NDEL1-209ENST00000580738 CCL18P55774 89 aa13.36□□□□□ -0.27
NDEL1-209ENST00000580738 KRTAP1-5Q9BYS1 174 aa13.36□□□□□ -0.27
NDEL1-209ENST00000580738 VCX3BQ9H321 246 aa13.36□□□□□ -0.27
NDEL1-209ENST00000580738 A0A0J9YX75 114 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 ZNF705GA8MUZ8 300 aaPredicted RBP13.35□□□□□ -0.27
NDEL1-209ENST00000580738 INAFM2P0DMQ5 153 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 RPS19P39019 145 aaKnown RBP13.35□□□□□ -0.27
NDEL1-209ENST00000580738 AARDQ4LEZ3 155 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 SPATA31B1PQ5VZV4 182 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 EBLN2Q6P2I7 272 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 SNX29P2Q8IUI4 249 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 RNASE11Q8TAA1 199 aaKnown RBP13.35□□□□□ -0.27
NDEL1-209ENST00000580738 GPR146Q96CH1 333 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 RNF125Q96EQ8 232 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 ZNF486Q96H40 463 aaPredicted RBP13.35□□□□□ -0.27
NDEL1-209ENST00000580738 TMEM208Q9BTX3 173 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 PBDC1Q9BVG4 233 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 RAB26Q9ULW5 256 aa13.35□□□□□ -0.27
NDEL1-209ENST00000580738 FCN2Q15485 313 aa13.34□□□□□ -0.27
NDEL1-209ENST00000580738 CROCCP3Q8IVE0 287 aa13.34□□□□□ -0.27
NDEL1-209ENST00000580738 SLC24A4Q8NFF2 622 aa13.34□□□□□ -0.27
NDEL1-209ENST00000580738 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
NDEL1-209ENST00000580738 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
NDEL1-209ENST00000580738 LYRM9A8MSI8 78 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 ELK1P19419 428 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 UCP1P25874 307 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 ETFRF1Q6IPR1 90 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 AMTNQ6UX39 209 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 SSX7Q7RTT5 188 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 LHFPL1Q86WI0 220 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 C20orf173Q96LM9 149 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 IGF2BP2-AS1Q96M15 143 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 Q9H8V8 135 aa13.33□□□□□ -0.28
NDEL1-209ENST00000580738 RNF141Q8WVD5 230 aa13.32□□□□□ -0.28
NDEL1-209ENST00000580738 CEBPZOSA8MTT3 80 aa13.31□□□□□ -0.28
NDEL1-209ENST00000580738 ISLRO14498 428 aa13.31□□□□□ -0.28
NDEL1-209ENST00000580738 NUP62P37198 522 aaPredicted RBP13.31□□□□□ -0.28
NDEL1-209ENST00000580738 DLK1P80370 383 aa13.31□□□□□ -0.28
NDEL1-209ENST00000580738 NEDD8Q15843 81 aa13.31□□□□□ -0.28
NDEL1-209ENST00000580738 OR8G2PQ6IF36 304 aa13.31□□□□□ -0.28
NDEL1-209ENST00000580738 DOK5Q9P104 306 aa13.31□□□□□ -0.28
NDEL1-209ENST00000580738 COPZ2Q9P299 210 aa13.31□□□□□ -0.28
NDEL1-209ENST00000580738 FAT1Q14517 4588 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 PLAC8L1A1L4L8 177 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 A8MTW9 85 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 AZU1P20160 251 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 ZNF90Q03938 601 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 CLINT1Q14677 625 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 LHFPL5Q8TAF8 219 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 ABHD1Q96SE0 405 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 RPRMQ9NS64 109 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 CACNG5Q9UF02 275 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 PFDN2Q9UHV9 154 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 MYCBP2O75592 4640 aa13.3□□□□□ -0.28
NDEL1-209ENST00000580738 M0R2Z0 102 aa13.29□□□□□ -0.28
NDEL1-209ENST00000580738 CRXO43186 299 aaPredicted RBP13.29□□□□□ -0.28
NDEL1-209ENST00000580738 CDS2O95674 445 aa13.29□□□□□ -0.28
NDEL1-209ENST00000580738 ATP5G1P05496 136 aa13.29□□□□□ -0.28
NDEL1-209ENST00000580738 BTF3P20290 206 aaKnown RBP13.29□□□□□ -0.28
NDEL1-209ENST00000580738 ATP5G3P48201 142 aa13.29□□□□□ -0.28
NDEL1-209ENST00000580738 SUPT4H1P63272 117 aaKnown RBP13.29□□□□□ -0.28
NDEL1-209ENST00000580738 KLF9Q13886 244 aaPredicted RBP13.29□□□□□ -0.28
NDEL1-209ENST00000580738 RNASE12Q5GAN4 147 aaKnown RBP13.29□□□□□ -0.28
NDEL1-209ENST00000580738 C1orf194Q5T5A4 169 aa13.29□□□□□ -0.28
NDEL1-209ENST00000580738 FAM219AQ8IW50 185 aa13.29□□□□□ -0.28
NDEL1-209ENST00000580738 TMEM222Q9H0R3 208 aa13.29□□□□□ -0.28
NDEL1-209ENST00000580738 COMMD3Q9UBI1 195 aa13.29□□□□□ -0.28
NDEL1-209ENST00000580738 IGKV1D-37A0A075B6S9 117 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 SMIM31A0A1B0GVY4 71 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 CD3DP04234 171 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 LSM3P62310 102 aaKnown RBP13.28□□□□□ -0.28
NDEL1-209ENST00000580738 MEF2DQ14814 521 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 SPINK13Q1W4C9 94 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 RNASE10Q5GAN6 216 aaKnown RBP13.28□□□□□ -0.28
NDEL1-209ENST00000580738 NMSQ5H8A3 153 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 CCDC71LQ8N9Z2 235 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 OR4C16Q8NGL9 310 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 OR13C8Q8NGS7 320 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 UHRF2Q96PU4 802 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 Q9H3A6 140 aa13.28□□□□□ -0.28
NDEL1-209ENST00000580738 CBY3A6NI87 242 aa13.27□□□□□ -0.29
NDEL1-209ENST00000580738 OR5AC1P0C628 307 aa13.27□□□□□ -0.29
NDEL1-209ENST00000580738 TSPOP30536 169 aa13.27□□□□□ -0.29
NDEL1-209ENST00000580738 LYZP61626 148 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms