RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 C20orf85Q9H1P6 137 aa19.79■□□□□ 0.76
LINC00271-205ENST00000579339 TRAV2A0A0B4J234 112 aa19.78■□□□□ 0.76
LINC00271-205ENST00000579339 C16orf54Q6UWD8 224 aa19.78■□□□□ 0.76
LINC00271-205ENST00000579339 Q6ZWC4 215 aa19.78■□□□□ 0.76
LINC00271-205ENST00000579339 K7EQG2 157 aa19.77■□□□□ 0.76
LINC00271-205ENST00000579339 UBE2CO00762 179 aa19.77■□□□□ 0.76
LINC00271-205ENST00000579339 SPRY2O43597 315 aa19.77■□□□□ 0.76
LINC00271-205ENST00000579339 IFNA21P01568 189 aa19.77■□□□□ 0.76
LINC00271-205ENST00000579339 POLR2GP62487 172 aaKnown RBP eCLIP19.77■□□□□ 0.76
LINC00271-205ENST00000579339 SPANXN5Q5MJ07 72 aa19.77■□□□□ 0.76
LINC00271-205ENST00000579339 GLMPQ8WWB7 406 aa19.77■□□□□ 0.76
LINC00271-205ENST00000579339 PBDC1Q9BVG4 233 aa19.77■□□□□ 0.76
LINC00271-205ENST00000579339 RYR2Q92736 4967 aa19.76■□□□□ 0.75
LINC00271-205ENST00000579339 ID3Q02535 119 aa19.76■□□□□ 0.75
LINC00271-205ENST00000579339 OR4D5Q8NGN0 318 aa19.76■□□□□ 0.75
LINC00271-205ENST00000579339 RNF125Q96EQ8 232 aa19.76■□□□□ 0.75
LINC00271-205ENST00000579339 ZNF688P0C7X2 276 aa19.75■□□□□ 0.75
LINC00271-205ENST00000579339 RPP30P78346 268 aaKnown RBP19.75■□□□□ 0.75
LINC00271-205ENST00000579339 OR2F1Q13607 317 aa19.75■□□□□ 0.75
LINC00271-205ENST00000579339 TP53TG1Q9Y2A0 90 aa19.75■□□□□ 0.75
LINC00271-205ENST00000579339 TRAV6A0A075B6T7 132 aa19.74■□□□□ 0.75
LINC00271-205ENST00000579339 PRSS46E5RG02 174 aa19.74■□□□□ 0.75
LINC00271-205ENST00000579339 NKX2-1P43699 371 aaPredicted RBP19.74■□□□□ 0.75
LINC00271-205ENST00000579339 CNPY1Q3B7I2 92 aa19.74■□□□□ 0.75
LINC00271-205ENST00000579339 DCANP1Q8TF63 244 aa19.74■□□□□ 0.75
LINC00271-205ENST00000579339 RNF183Q96D59 192 aa19.74■□□□□ 0.75
LINC00271-205ENST00000579339 CCDC32Q9BV29 185 aa19.74■□□□□ 0.75
LINC00271-205ENST00000579339 CSTL1Q9H114 145 aa19.74■□□□□ 0.75
LINC00271-205ENST00000579339 IGKV1OR2-108A0A075B7D4 117 aa19.73■□□□□ 0.75
LINC00271-205ENST00000579339 HELTA6NFD8 242 aa19.73■□□□□ 0.75
LINC00271-205ENST00000579339 BUB3O43684 328 aa19.73■□□□□ 0.75
LINC00271-205ENST00000579339 SSSCA1O60232 199 aa19.73■□□□□ 0.75
LINC00271-205ENST00000579339 TCRBP04435 133 aa19.73■□□□□ 0.75
LINC00271-205ENST00000579339 EIF2B2P49770 351 aaKnown RBP19.73■□□□□ 0.75
LINC00271-205ENST00000579339 LYZP61626 148 aa19.73■□□□□ 0.75
LINC00271-205ENST00000579339 MITD1Q8WV92 249 aa19.73■□□□□ 0.75
LINC00271-205ENST00000579339 STRAPQ9Y3F4 350 aaKnown RBP19.73■□□□□ 0.75
LINC00271-205ENST00000579339 SCGB1D2O95969 90 aa19.72■□□□□ 0.75
LINC00271-205ENST00000579339 IAH1Q2TAA2 248 aaPredicted RBP19.72■□□□□ 0.75
LINC00271-205ENST00000579339 THAP8Q8NA92 274 aa19.72■□□□□ 0.75
LINC00271-205ENST00000579339 TENM2Q9NT68 2774 aa19.72■□□□□ 0.75
LINC00271-205ENST00000579339 A0A0J9YWU9 116 aa19.71■□□□□ 0.75
LINC00271-205ENST00000579339 TRGV9Q99603 122 aa19.71■□□□□ 0.75
LINC00271-205ENST00000579339 NUDT15Q9NV35 164 aa19.71■□□□□ 0.75
LINC00271-205ENST00000579339 PSENENQ9NZ42 101 aa19.71■□□□□ 0.75
LINC00271-205ENST00000579339 A6NHS1 94 aa19.7■□□□□ 0.74
LINC00271-205ENST00000579339 KNCNA6PVL3 124 aa19.7■□□□□ 0.74
LINC00271-205ENST00000579339 CCSO14618 274 aa19.7■□□□□ 0.74
LINC00271-205ENST00000579339 SIGLEC15Q6ZMC9 328 aa19.7■□□□□ 0.74
LINC00271-205ENST00000579339 ACOT7LQ6ZUV0 252 aa19.7■□□□□ 0.74
LINC00271-205ENST00000579339 ZBTB8BQ8NAP8 495 aaPredicted RBP19.7■□□□□ 0.74
LINC00271-205ENST00000579339 LYSTQ99698 3801 aa19.7■□□□□ 0.74
LINC00271-205ENST00000579339 SEC22CQ9BRL7 303 aa19.7■□□□□ 0.74
LINC00271-205ENST00000579339 FABP1P07148 127 aa19.69■□□□□ 0.74
LINC00271-205ENST00000579339 AP2S1P53680 142 aaPredicted RBP19.69■□□□□ 0.74
LINC00271-205ENST00000579339 EWSR1Q01844 656 aaKnown RBP eCLIP19.69■□□□□ 0.74
LINC00271-205ENST00000579339 OR8G2PQ6IF36 304 aa19.69■□□□□ 0.74
LINC00271-205ENST00000579339 STHQ8IWL8 128 aa19.69■□□□□ 0.74
LINC00271-205ENST00000579339 GSKIPQ9P0R6 139 aa19.69■□□□□ 0.74
LINC00271-205ENST00000579339 PLECQ15149 4684 aaKnown RBP19.69■□□□□ 0.74
LINC00271-205ENST00000579339 SNRPGP15A8MWD9 76 aa19.68■□□□□ 0.74
LINC00271-205ENST00000579339 CCNKO75909 580 aa19.68■□□□□ 0.74
LINC00271-205ENST00000579339 CA1P00915 261 aaPredicted RBP19.68■□□□□ 0.74
LINC00271-205ENST00000579339 AKR1C1Q04828 323 aa19.68■□□□□ 0.74
LINC00271-205ENST00000579339 PSMG4Q5JS54 123 aa19.68■□□□□ 0.74
LINC00271-205ENST00000579339 IL17DQ8TAD2 202 aa19.68■□□□□ 0.74
LINC00271-205ENST00000579339 TBC1D24Q9ULP9 559 aa19.68■□□□□ 0.74
LINC00271-205ENST00000579339 AGRNO00468 2067 aa19.67■□□□□ 0.74
LINC00271-205ENST00000579339 PAX9P55771 341 aa19.67■□□□□ 0.74
LINC00271-205ENST00000579339 LINC00299Q6ZSB3 139 aa19.67■□□□□ 0.74
LINC00271-205ENST00000579339 S100ZQ8WXG8 99 aa19.67■□□□□ 0.74
LINC00271-205ENST00000579339 NRN1Q9NPD7 142 aa19.67■□□□□ 0.74
LINC00271-205ENST00000579339 SMCO3A2RU48 225 aa19.66■□□□□ 0.74
LINC00271-205ENST00000579339 GATA2P23769 480 aaPredicted RBP19.66■□□□□ 0.74
LINC00271-205ENST00000579339 ACTL10Q5JWF8 245 aa19.66■□□□□ 0.74
LINC00271-205ENST00000579339 GSG1LQ6UXU4 331 aa19.66■□□□□ 0.74
LINC00271-205ENST00000579339 SMIM8Q96KF7 97 aa19.66■□□□□ 0.74
LINC00271-205ENST00000579339 PMS2P5A8MQ11 134 aa19.65■□□□□ 0.74
LINC00271-205ENST00000579339 H2AFB2P0C5Z0 115 aa19.65■□□□□ 0.74
LINC00271-205ENST00000579339 NUP62P37198 522 aaPredicted RBP19.65■□□□□ 0.74
LINC00271-205ENST00000579339 TMEM182Q6ZP80 229 aaPredicted RBP19.65■□□□□ 0.74
LINC00271-205ENST00000579339 TRPT1Q86TN4 253 aaKnown RBP19.65■□□□□ 0.74
LINC00271-205ENST00000579339 ZNF431Q8TF32 576 aaPredicted RBP19.65■□□□□ 0.74
LINC00271-205ENST00000579339 PPP1R14BQ96C90 147 aa19.65■□□□□ 0.74
LINC00271-205ENST00000579339 RCL1Q9Y2P8 373 aaKnown RBP19.65■□□□□ 0.74
LINC00271-205ENST00000579339 FAM240BA0A1B0GVZ2 78 aa19.64■□□□□ 0.73
LINC00271-205ENST00000579339 FAM25EA8MYX2 175 aa19.64■□□□□ 0.73
LINC00271-205ENST00000579339 METTL15P1P0C7V9 234 aa19.64■□□□□ 0.73
LINC00271-205ENST00000579339 PFDN2Q9UHV9 154 aa19.64■□□□□ 0.73
LINC00271-205ENST00000579339 MBPP02686 304 aaPredicted RBP19.63■□□□□ 0.73
LINC00271-205ENST00000579339 RRAS2P62070 204 aaPredicted RBP19.63■□□□□ 0.73
LINC00271-205ENST00000579339 TMEM14EPQ6UXP3 125 aa19.63■□□□□ 0.73
LINC00271-205ENST00000579339 DNAH1Q9P2D7 4330 aa19.62■□□□□ 0.73
LINC00271-205ENST00000579339 PMS2P11Q13670 270 aa19.62■□□□□ 0.73
LINC00271-205ENST00000579339 TMEM144Q7Z5S9 345 aa19.62■□□□□ 0.73
LINC00271-205ENST00000579339 GATAD1Q8WUU5 269 aa19.62■□□□□ 0.73
LINC00271-205ENST00000579339 RAB40CQ96S21 281 aa19.62■□□□□ 0.73
LINC00271-205ENST00000579339 RARRES2Q99969 163 aa19.62■□□□□ 0.73
LINC00271-205ENST00000579339 LCE6AA0A183 80 aa19.61■□□□□ 0.73
LINC00271-205ENST00000579339 GIG44P09565 113 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms