RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, human

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBB-208	ENST00000578706	OR10G9	Q8NGN4	311 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	OR10G7	Q8NGN6	311 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	IL17D	Q8TAD2	202 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	ST6GALNAC6	Q969X2	333 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	NOL4L	Q96MY1	436 aa	Predicted RBP	4.85	□□□□□ -1.63
UBB-208	ENST00000578706	RARRES2	Q99969	163 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	NABP2	Q9BQ15	211 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	MRPL20	Q9BYC9	149 aa	Known RBP	4.85	□□□□□ -1.63
UBB-208	ENST00000578706	TUBA4B	Q9H853	241 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	PLEKHA3	Q9HB20	300 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	GNG13	Q9P2W3	67 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	VAX2	Q9UIW0	290 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	OR51B2	Q9Y5P1	312 aa		4.85	□□□□□ -1.63
UBB-208	ENST00000578706	TNC	P24821	2201 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	DSCAML1	Q8TD84	2053 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	INS-IGF2	F8WCM5	200 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706		M0R036	132 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	RRH	O14718	337 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	IGKV1-16	P04430	117 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	IFNA4	P05014	189 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	RPLP1	P05386	114 aa	Known RBP	4.84	□□□□□ -1.63
UBB-208	ENST00000578706	SAA1	P0DJI8	122 aa	Predicted RBP	4.84	□□□□□ -1.63
UBB-208	ENST00000578706	OR13C7	P0DN81	318 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	ATF4	P18848	351 aa	Predicted RBP	4.84	□□□□□ -1.63
UBB-208	ENST00000578706	CEACAM3	P40198	252 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	CDX1	P47902	265 aa	Predicted RBP	4.84	□□□□□ -1.63
UBB-208	ENST00000578706	LGALS7	P47929	136 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	B2M	P61769	119 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	RAB31	Q13636	194 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	DEFB136	Q30KP8	78 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	ACSM6	Q6P461	480 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	TMEM88	Q6PEY1	159 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	LCN15	Q6UWW0	184 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	SLC35E3	Q7Z769	313 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	TGIF2LX	Q8IUE1	241 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	CBLN2	Q8IUK8	224 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	ABHD12	Q8N2K0	398 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	C15orf54	Q8N8G6	183 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	OR4P4	Q8NGL7	312 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	OR1L8	Q8NGR8	309 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	TMEM167A	Q8TBQ9	72 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	RXFP4	Q8TDU9	374 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	FLYWCH2	Q96CP2	140 aa	Known RBP	4.84	□□□□□ -1.63
UBB-208	ENST00000578706	HARBI1	Q96MB7	349 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	COMMD5	Q9GZQ3	224 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	VSIR	Q9H7M9	311 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	NPVF	Q9HCQ7	196 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	RPS10P5	Q9NQ39	176 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	MANBAL	Q9NQG1	85 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	LINC00527	Q9UJ94	153 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	MOB4	Q9Y3A3	225 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	WASHC3	Q9Y3C0	194 aa		4.84	□□□□□ -1.63
UBB-208	ENST00000578706	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.84	□□□□□ -1.63
UBB-208	ENST00000578706		A0A087WWC5	75 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	TEX50	A0A1B0GTY4	177 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706		A0A1W2PN81	502 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	SMCO3	A2RU48	225 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	C7orf77	A4D0Y5	90 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	ZFP92	A6NM28	416 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706		B4DEV8	164 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	TMEM250	H0YL14	139 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706		H3BQ15	152 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	CA2	P00918	260 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	IGKV1D-33	P01593	117 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	IGKV1-33	P01594	117 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	CHRNA7	P36544	502 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	CDC34	P49427	236 aa	Predicted RBP	4.83	□□□□□ -1.64
UBB-208	ENST00000578706	PSMB3	P49720	205 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	RPL8	P62917	257 aa	Known RBP	4.83	□□□□□ -1.64
UBB-208	ENST00000578706	FLI1	Q01543	452 aa	Predicted RBP	4.83	□□□□□ -1.64
UBB-208	ENST00000578706	PNRC1	Q12796	327 aa	Predicted RBP	4.83	□□□□□ -1.64
UBB-208	ENST00000578706	BSX	Q3C1V8	233 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	VMA21	Q3ZAQ7	101 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	C2orf83	Q53S99	150 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	CCDC144NL	Q6NUI1	221 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	TEPP	Q6URK8	271 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	SSX7	Q7RTT5	188 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	CYB561D1	Q8N8Q1	229 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	OR11H1	Q8NG94	326 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	TMEM170A	Q8WVE7	144 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	TVP23C	Q96ET8	276 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	NIPSNAP3B	Q9BS92	247 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	GGTLC1	Q9BX51	225 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706	DNAH6	Q9C0G6	4158 aa		4.83	□□□□□ -1.64
UBB-208	ENST00000578706		A0A1B0GVY2	172 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706		A0A1W2PPV4	95 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	SRRM4	A7MD48	611 aa	Known RBP	4.82	□□□□□ -1.64
UBB-208	ENST00000578706	OOSP1	A8MZH6	123 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	BUB1B-PAK6	H3BSN5	160 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	IGLV1-47	P01700	117 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	IGHG2	P01859	326 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	MT-ND4L	P03901	98 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	ELANE	P08246	267 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	FOLR2	P14207	255 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	GP9	P14770	177 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	MAS1L	P35410	378 aa		4.82	□□□□□ -1.64
UBB-208	ENST00000578706	GPX4	P36969	197 aa	Predicted RBP	4.82	□□□□□ -1.64
UBB-208	ENST00000578706	RPL29	P47914	159 aa	Known RBP	4.82	□□□□□ -1.64
UBB-208	ENST00000578706	SUB1	P53999	127 aa	Known RBP eCLIP	4.82	□□□□□ -1.64	3e-48	■■■■■ 40.9
UBB-208	ENST00000578706	FGF8	P55075	233 aa	Predicted RBP	4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms