RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CFAP47Q6ZTR5 3102 aa8.78□□□□□ -1
SKA2-204ENST00000578519 TRAV9-1A0A075B6T8 112 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 TRBV7-1A0A0A6YYK4 115 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 TRAV5A0A0B4J249 113 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 H3BUA1 57 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 NPPCP23582 126 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 CRYBB3P26998 211 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 NECAP1Q8NC96 275 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 RNF125Q96EQ8 232 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 SMIM12Q96EX1 92 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 ZNF503Q96F45 646 aa8.77□□□□□ -1.01
SKA2-204ENST00000578519 SLC25A39Q9BZJ4 359 aaPredicted RBP8.77□□□□□ -1.01
SKA2-204ENST00000578519 WI2-2373I1.2A0A1W2PRP0 233 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 FAM223BA6NKX1 122 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 PPP5D1E7EU14 171 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 K7EQM0 130 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 BMPR1BO00238 502 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 OR2J3O76001 311 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 NDUFB8O95169 186 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 IGKV1-17P01599 117 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 SLC25A5P05141 298 aaKnown RBP8.76□□□□□ -1.01
SKA2-204ENST00000578519 EGR2P11161 476 aaPredicted RBP8.76□□□□□ -1.01
SKA2-204ENST00000578519 RPL35P42766 123 aaKnown RBP8.76□□□□□ -1.01
SKA2-204ENST00000578519 CRIP2P52943 208 aaPredicted RBP8.76□□□□□ -1.01
SKA2-204ENST00000578519 UBE2G1P62253 170 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 ECSCRQ19T08 205 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 FAM209BQ5JX69 171 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 ASPHD1Q5U4P2 390 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 FAM223AQ8IWN6 122 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 CMTM2Q8TAZ6 248 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 FXYD5Q96DB9 178 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 SFRP2Q96HF1 295 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 YPEL4Q96NS1 127 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 SHANK2-AS3Q9BTD1 123 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 OTORQ9NRC9 128 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 DMRT1Q9Y5R6 373 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 URGCP-MRPS24S4R325 110 aa8.76□□□□□ -1.01
SKA2-204ENST00000578519 TPRP12270 2363 aaKnown RBP8.75□□□□□ -1.01
SKA2-204ENST00000578519 TRAV41A0A0B4J266 112 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 A0A0U1RQK1 487 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 PGPA6NDG6 321 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 ATP6V0E1O15342 81 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 BRI3O95415 125 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 IL4P05112 153 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 RELQ04864 619 aaPredicted RBP8.75□□□□□ -1.01
SKA2-204ENST00000578519 ATP5G2Q06055 141 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 SRSF1Q07955 248 aaKnown RBP eCLIP8.75□□□□□ -1.01
SKA2-204ENST00000578519 FOXL1Q12952 345 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 COX19Q49B96 90 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 RUSC1-AS1Q66K80 236 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 ZNF600Q6ZNG1 722 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 ZNF491Q8N8L2 437 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 C5orf17Q8NAS9 161 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 OR5R1Q8NH85 324 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 OCC1Q8TAD7 63 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 MBD6Q96DN6 1003 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 GPR82Q96P67 336 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 SRD5A3Q9H8P0 318 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 RABAC1Q9UI14 185 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 CDC42EP3Q9UKI2 254 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 EPDR1Q9UM22 224 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 CACNA1BQ00975 2339 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 NBASA2RRP1 2371 aa8.75□□□□□ -1.01
SKA2-204ENST00000578519 IGHV3OR16-10A0A075B7F0 116 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 TRBV9A0A0B4J1U6 114 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 A6NDX4 124 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 H3BRN7 92 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 J3QKU1 62 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 PEX7O00628 323 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 TGFAP01135 160 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 PFN1P07737 140 aaKnown RBP8.74□□□□□ -1.01
SKA2-204ENST00000578519 PYYP10082 97 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 RPL7P18124 248 aaKnown RBP8.74□□□□□ -1.01
SKA2-204ENST00000578519 FAM3BP58499 235 aaPredicted RBP8.74□□□□□ -1.01
SKA2-204ENST00000578519 RANP62826 216 aaKnown RBP8.74□□□□□ -1.01
SKA2-204ENST00000578519 RHOGP84095 191 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 NDPQ00604 133 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 PSG9Q00887 426 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 PDE6HQ13956 83 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 KLF17Q5JT82 389 aaPredicted RBP8.74□□□□□ -1.01
SKA2-204ENST00000578519 C9orf152Q5JTZ5 239 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 BRD3OSQ6XYD6 125 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 C19orf35Q6ZS72 473 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 ZNF329Q86UD4 541 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 ARL6IP6Q8N6S5 226 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 C2CD4CQ8TF44 421 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 BLNKQ8WV28 456 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 FMC1Q96HJ9 113 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 USMG5Q96IX5 58 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 PYGO2Q9BRQ0 406 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 ELOVL1Q9BW60 279 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 PKD1L2Q7Z442 2459 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 ATMQ13315 3056 aa8.74□□□□□ -1.01
SKA2-204ENST00000578519 TNCP24821 2201 aa8.73□□□□□ -1.01
SKA2-204ENST00000578519 BOD1L1Q8NFC6 3051 aa8.73□□□□□ -1.01
SKA2-204ENST00000578519 SERTM2A0A1B0GWG4 89 aa8.73□□□□□ -1.01
SKA2-204ENST00000578519 FBLL1A6NHQ2 334 aaKnown RBP8.73□□□□□ -1.01
SKA2-204ENST00000578519 GGTLC3B5MD39 225 aa8.73□□□□□ -1.01
SKA2-204ENST00000578519 H3BUX3 64 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms