RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	SPP1	P10451	314 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HLA-DRB4	P13762	266 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MIF	P14174	115 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	GATA2	P23769	480 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TNFSF8	P32971	234 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SNCA	P37840	140 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HOXA1	P49639	335 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	AKR1C2	P52895	323 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TAS2R19	P59542	299 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	DHRS2	Q13268	280 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TRIM16L	Q309B1	348 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SCGB2B2	Q4G0G5	96 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IGFL4	Q6B9Z1	124 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZNF575	Q86XF7	245 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	THAP8	Q8NA92	274 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SLC24A4	Q8NFF2	622 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OR1S2	Q8NGQ3	325 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RNASEH2C	Q8TDP1	164 aa	Known RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CLUHP3	Q96NS8	147 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	METTL26	Q96S19	204 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	NEU1	Q99519	415 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SDHC	Q99643	169 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	GINS3	Q9BRX5	216 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RNF126	Q9BV68	326 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	KRTAP1-5	Q9BYS1	174 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SAV1	Q9H4B6	383 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	NRN1	Q9NPD7	142 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	DKK2	Q9UBU2	259 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TBC1D24	Q9ULP9	559 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329		V9GYH0	126 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HLA-DRB4	X5D2U9	266 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	DNAH5	Q8TE73	4624 aa		3.14	□□□□□ -1.91
PPP4R1-209	ENST00000578329	DEFB131B	A0A096LNP1	70 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TRAV10	A0A0B4J240	114 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329		A0A0B4J2A0	478 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329		A0A0J9YX75	114 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HELT	A6NFD8	242 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FAM25A	B3EWG3	89 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FAM25C	B3EWG5	89 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FAM25G	B3EWG6	89 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329		M0R2N4	97 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	DNASE2	O00115	360 aa	Predicted RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CYB5B	O43169	146 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IGKV3-20	P01619	116 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CD5	P06127	495 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	AZU1	P20160	251 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	NPY1R	P25929	384 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HTR2B	P41595	481 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	NKX2-1	P43699	371 aa	Predicted RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PAX9	P55771	341 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CMC4	P56277	68 aa	Predicted RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RPL11	P62913	178 aa	Known RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SSBP1	Q04837	148 aa	Known RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OR2F1	Q13607	317 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	KIR3DS1	Q14943	382 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SURF2	Q15527	256 aa	Predicted RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MORN5	Q5VZ52	161 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PATE2	Q6UY27	113 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	STH	Q8IWL8	128 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TMEM217	Q8N7C4	229 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	POM121L12	Q8N7R1	296 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZFAND1	Q8TCF1	268 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IL22RA2	Q969J5	263 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RNF125	Q96EQ8	232 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ACY3	Q96HD9	319 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MFF	Q9GZY8	342 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RBM38	Q9H0Z9	239 aa	Known RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SLC25A32	Q9H2D1	315 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SEPSECS	Q9HD40	501 aa	Known RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HEYL	Q9NQ87	328 aa	Predicted RBP	3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	COPZ2	Q9P299	210 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SHPK	Q9UHJ6	478 aa		3.13	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IGLV2-18	A0A075B6J9	118 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TRAV30	A0A087WSZ9	112 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SMIM31	A0A1B0GVY4	71 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	C11orf94	C9JXX5	98 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329		H3BMQ9	156 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CORT	O00230	105 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	AKAIN1	P0CW23	69 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RD3L	P0DJH9	198 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SULT1A3	P0DMM9	295 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SULT1A4	P0DMN0	295 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SLC25A4	P12235	298 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	BTC	P35070	178 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	EIF2B2	P49770	351 aa	Known RBP	3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TCTA	P57738	103 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PAFAH1B2	P68402	229 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ARL16	Q0P5N6	197 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SMCO1	Q147U7	214 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FCN2	Q15485	313 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LGALS9B	Q3B8N2	356 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FAM222A	Q5U5X8	452 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FAM78B	Q5VT40	261 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SIGLEC15	Q6ZMC9	328 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LRTM2	Q8N967	370 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	DTD1	Q8TEA8	209 aa		3.12	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms