RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 OPCMLQ14982 345 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 TCTEX1D4Q5JR98 221 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 C10orf99Q6UWK7 81 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 SLC51BQ86UW2 128 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 C1QL4Q86Z23 238 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 NPIPB3Q92617 1050 aa6.19□□□□□ -1.42
COPS3-215ENST00000578317 WDR61Q9GZS3 305 aaKnown RBP6.19□□□□□ -1.42
COPS3-215ENST00000578317 MRPL36Q9P0J6 103 aaKnown RBP6.19□□□□□ -1.42
COPS3-215ENST00000578317 TET2Q6N021 2002 aaPredicted RBP6.19□□□□□ -1.42
COPS3-215ENST00000578317 IGKV1OR2-108A0A075B7D4 117 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 BORCS7-ASMTA0A0B4J1R7 106 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 CTSGP08311 255 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 IGLC1P0CG04 106 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 RND2P52198 227 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 SELENOTP62341 195 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 RUNX1Q01196 453 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 RAB31Q13636 194 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 RPL7L1Q6DKI1 246 aaKnown RBP6.18□□□□□ -1.42
COPS3-215ENST00000578317 ACSM6Q6P461 480 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 SPSB3Q6PJ21 355 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.18□□□□□ -1.42
COPS3-215ENST00000578317 STOML3Q8TAV4 291 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 TRGV9Q99603 122 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 SMIM3Q9BZL3 60 aa6.18□□□□□ -1.42
COPS3-215ENST00000578317 IGKV1D-37A0A075B6S9 117 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 SCGB2A1O75556 95 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 CFDP00746 253 aaPredicted RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 IGKV1-17P01599 117 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 IGHV3-48P01763 117 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 RPL29P47914 159 aaKnown RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 YPEL3P61236 119 aaPredicted RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 SERF2P84101 59 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 BTNL8Q6UX41 500 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 BAP18Q8IXM2 172 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 SCGB1C1Q8TD33 95 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 ACY3Q96HD9 319 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 NEU1Q99519 415 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 GINS3Q9BRX5 216 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 IGHV3-21A0A0B4J1V1 117 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 UBE2L5PA0A1B0GUS4 154 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 TCRBV4S1A1TA0A5B7 111 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 SMCO3A2RU48 225 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 ZFP92A6NM28 416 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 I3L521 148 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 NUPL2O15504 423 aaKnown RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 GNG7O60262 68 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 FABP1P07148 127 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 TPT1P13693 172 aaKnown RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 OR10J1P30954 320 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 CAMLGP49069 296 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 AKR1C1Q04828 323 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 KRTAP24-1Q3LI83 254 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 Q56UQ5 140 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 AWAT1Q58HT5 328 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 CLEC19AQ6UXS0 136 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 LCNL1Q6ZST4 164 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 ZNF709Q8N972 641 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 GNPNAT1Q96EK6 184 aaPredicted RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 MGST2Q99735 147 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 PSMG3Q9BT73 122 aaPredicted RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 ZNF471Q9BX82 626 aaPredicted RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 PEF1Q9UBV8 284 aaKnown RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 TIMM9Q9Y5J7 89 aa6.17□□□□□ -1.42
COPS3-215ENST00000578317 TSSC4Q9Y5U2 329 aaPredicted RBP6.17□□□□□ -1.42
COPS3-215ENST00000578317 C17orf112F2Z3M2 114 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 AGPAT2O15120 278 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 TGOLN2O43493 480 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 OR2C1O95371 312 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 HSPB1P04792 205 aaKnown RBP6.16□□□□□ -1.42
COPS3-215ENST00000578317 LGALS1P09382 135 aaKnown RBP6.16□□□□□ -1.42
COPS3-215ENST00000578317 SEC11BP0C7V7 166 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 SPP1P10451 314 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 CD28P10747 220 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 FGF7P21781 194 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 ATP6V0CP27449 155 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 EIF5AL1Q6IS14 154 aaKnown RBP6.16□□□□□ -1.42
COPS3-215ENST00000578317 CYP2G1PQ6ZSU1 146 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 OR2G3Q8NGZ4 309 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 C4orf3Q8WVX3 66 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 TMEM158Q8WZ71 300 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 PHYHIPLQ96FC7 376 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 GGTLC1Q9BX51 225 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 NPCDR1Q9BY65 106 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 GNB4Q9HAV0 340 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 KCNIP2Q9NS61 270 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 TENM1Q9UKZ4 2725 aa6.16□□□□□ -1.42
COPS3-215ENST00000578317 COL6A5A8TX70 2615 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 OR2T8A6NH00 312 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 DIRC3C9JPN6 131 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 GGCTO75223 188 aaKnown RBP6.15□□□□□ -1.42
COPS3-215ENST00000578317 TOMM40O96008 361 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 IGHV3-11P01762 117 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 LINC00869P0C866 280 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 RD3LP0DJH9 198 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 GPR183P32249 361 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 PLP1P60201 277 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 KRTAP10-3P60369 221 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 ZNF90Q03938 601 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 RELQ04864 619 aaPredicted RBP6.15□□□□□ -1.42
COPS3-215ENST00000578317 PXDC1Q5TGL8 231 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms