RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ASPMQ8IZT6 3477 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 GGTLC3B5MD39 225 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 SERF1AO75920 110 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 RNF224P0DH78 156 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 PMCHP20382 165 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 USF1P22415 310 aaPredicted RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 TPPP2P59282 170 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 KRTDAPP60985 99 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 SSBP2P81877 361 aaPredicted RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 PLGLAQ15195 96 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 TNXAQ16473 311 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 POU2AF1Q16633 256 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 C2orf83Q53S99 150 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 PRR30Q53SZ7 412 aaPredicted RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 MORN5Q5VZ52 161 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 C10orf113Q5VZT2 155 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 ZNF705AQ6ZN79 300 aaPredicted RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 OR1B1Q8NGR6 318 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 VSTM2AQ8TAG5 236 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 ST6GALNAC6Q969X2 333 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 PAXXQ9BUH6 204 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 ZNF430Q9H8G1 570 aaPredicted RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 ZNF355PQ9NSJ1 428 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 ATRXP46100 2492 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 TMEM178BH3BS89 294 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 NTF3P20783 257 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 MEF2CQ06413 473 aaPredicted RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 IBA57Q5T440 356 aaKnown RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 C19orf35Q6ZS72 473 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 RNASEH2CQ8TDP1 164 aaKnown RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 CBLN4Q9NTU7 201 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 NAGKQ9UJ70 344 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 WASHC3Q9Y3C0 194 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 SPRY2O43597 315 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 ZNF253O75346 499 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 SAP30O75446 220 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 IGF2RP11717 2491 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 WT1-ASQ06250 92 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 TEX36Q5VZQ5 186 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 ST6GALNAC3Q8NDV1 305 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 C22orf15Q8WYQ4 148 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 RNASE6Q93091 150 aaKnown RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 SLC25A33Q9BSK2 321 aa4.31□□□□□ -1.72
VAPA-203ENST00000577539 ZNF331Q9NQX6 463 aaPredicted RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 AMMECR1Q9Y4X0 333 aaPredicted RBP4.31□□□□□ -1.72
VAPA-203ENST00000577539 VWC2LB2RUY7 222 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 C9JCJ5 164 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 F2Z2F3 143 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 SLC25A5P05141 298 aaKnown RBP4.3□□□□□ -1.72
VAPA-203ENST00000577539 AMTP48728 403 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 CAMPP49913 170 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 BATFQ16520 125 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 TMEM30BQ3MIR4 351 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 ZNF833PQ6ZTB9 187 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 SIGLECL1Q8N7X8 197 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 NUP37Q8NFH4 326 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 VN1R17PQ8TDU5 208 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 ZNF503Q96F45 646 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 FNDC4Q9H6D8 234 aaPredicted RBP4.3□□□□□ -1.72
VAPA-203ENST00000577539 PAM16Q9Y3D7 125 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 PRB4P10163 310 aaPredicted RBP4.3□□□□□ -1.72
VAPA-203ENST00000577539 PDLIM4P50479 330 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 UBE2G1P62253 170 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 GNG5P63218 68 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 SSX2Q16385 188 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 Q6ZSN1 163 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 OR1L4Q8NGR5 311 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 CACNG8Q8WXS5 425 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 C11orf52Q96A22 123 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 NOL4LQ96MY1 436 aaPredicted RBP4.3□□□□□ -1.72
VAPA-203ENST00000577539 NDUFA4L2Q9NRX3 87 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 TNFRSF19Q9NS68 423 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 CTSZQ9UBR2 303 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 V9GYV3 84 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 TANC2Q9HCD6 1990 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 A0A1W2PRD5 423 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 A0A1W2PRF3 423 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 A0A1W2PRM7 423 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 A8MWP6 167 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 MED14OSP0DP75 135 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 SRIP30626 198 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 RPL27AP46776 148 aaKnown RBP4.3□□□□□ -1.72
VAPA-203ENST00000577539 MFAP2P55001 183 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 LBHQ53QV2 105 aaPredicted RBP4.3□□□□□ -1.72
VAPA-203ENST00000577539 LEMD1Q68G75 181 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 LINC00305Q7Z4B0 112 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 PDPNQ86YL7 162 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 LINC01560Q8TB33 94 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 TMEM167AQ8TBQ9 72 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 RITA1Q96K30 269 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 ASCL2Q99929 193 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 NDUFAF3Q9BU61 184 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 MRPL36Q9P0J6 103 aaKnown RBP4.3□□□□□ -1.72
VAPA-203ENST00000577539 ZNF835Q9Y2P0 537 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 INSIG2Q9Y5U4 225 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 CFAP47Q6ZTR5 3102 aa4.3□□□□□ -1.72
VAPA-203ENST00000577539 CUL9Q8IWT3 2517 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 IGHV1-69-2A0A0G2JMI3 117 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 A0A1W2PRE2 83 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 PGPA6NDG6 321 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms