RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ATG101Q9BSB4 218 aa7.13□□□□□ -1.27
NPLOC4-220ENST00000576940 HLA-DRB4X5D2U9 266 aa7.13□□□□□ -1.27
NPLOC4-220ENST00000576940 NAP1L6A6NFF2 107 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 FAM25AB3EWG3 89 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 FAM25CB3EWG5 89 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 FAM25GB3EWG6 89 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 HNRNPCP07910 306 aaKnown RBP eCLIP7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 HLA-DMAP28067 261 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 SUB1P53999 127 aaKnown RBP eCLIP7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 C1orf158Q8N1D5 194 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 Q8WTZ3 238 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 NRN1Q9NPD7 142 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 FAM212BQ9NTI7 297 aaPredicted RBP7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 COPZ2Q9P299 210 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 YTHDF2Q9Y5A9 579 aaKnown RBP7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 MYCBP2O75592 4640 aa7.12□□□□□ -1.27
NPLOC4-220ENST00000576940 INS-IGF2F8WCM5 200 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 CORTO00230 105 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 PLA2G10O15496 165 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 BUB3O43684 328 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 IGKV1-5P01602 117 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 PRM2P04554 102 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 NAT1P18440 290 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 HRH1P35367 487 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 FAM3BP58499 235 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 TAS2R20P59543 309 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 AP3S2P59780 193 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 DHODHQ02127 395 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 USF2Q15853 346 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 PYDC2Q56P42 97 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 TMEM69Q5SWH9 247 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 TRIQKQ629K1 86 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 MZT2BQ6NZ67 158 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 SLC35G3Q8N808 338 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 ZNF709Q8N972 641 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 OR4B1Q8NGF8 309 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 LINC00052Q96N35 136 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 SLC35B3Q9H1N7 401 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 SEPSECSQ9HD40 501 aaKnown RBP7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 MTFP1Q9UDX5 166 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 ANAPC10Q9UM13 185 aa7.11□□□□□ -1.27
NPLOC4-220ENST00000576940 TRAV30A0A087WSZ9 112 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 TEX48A0A1B0GUV7 120 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 LOC102723971A0A1B0GUV8 181 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 ANKRD20A5PA0PJZ0 165 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 IGLC1P0CG04 106 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 TBPP20226 339 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 NKX2-1P43699 371 aaPredicted RBP7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 TAS2R46P59540 309 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 DAD1P61803 113 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 TSPAN5P62079 268 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 KLF9Q13886 244 aaPredicted RBP7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 LPCAT3Q6P1A2 487 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 SIGLEC15Q6ZMC9 328 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 GPX8Q8TED1 209 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 MARVELD1Q9BSK0 173 aa7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 SAV1Q9H4B6 383 aaPredicted RBP7.1□□□□□ -1.27
NPLOC4-220ENST00000576940 RPS10-NUDT3A0A1W2PQS6 291 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 EPM2AB3EWF7 344 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 F6UB75 175 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 LYRM1O43325 122 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 NUDT3O95989 172 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 HBE1P02100 147 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 IL4P05112 153 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 P0C879 139 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 INAFM2P0DMQ5 153 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 S100GP29377 79 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 HOXA1P49639 335 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 PRSS54Q6PEW0 395 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 C15orf53Q8NAA6 179 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 OR1S2Q8NGQ3 325 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 PDCD10Q9BUL8 212 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 ENY2Q9NPA8 101 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 LINC00588Q9Y4M8 146 aa7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-220ENST00000576940 A0A1B0GVG6 124 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 CENPXA8MT69 81 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 SCGB2A1O75556 95 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 NXPH3O95157 252 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 PI3P19957 117 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 OR10J1P30954 320 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 PRSS3P35030 304 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 BTCP35070 178 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 BCAP31P51572 246 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 RND2P52198 227 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 YPEL3P61236 119 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 PSG9Q00887 426 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 FCN2Q15485 313 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 RRN3P1Q2M238 152 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 BSXQ3C1V8 233 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 FOXI2Q6ZQN5 318 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 NRARPQ7Z6K4 114 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 SNX29P2Q8IUI4 249 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 TP53RKQ96S44 253 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 KLK11Q9UBX7 282 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 GOLT1BQ9Y3E0 138 aa7.08□□□□□ -1.28
NPLOC4-220ENST00000576940 VPS13BQ7Z7G8 4022 aa7.07□□□□□ -1.28
NPLOC4-220ENST00000576940 A0A0G2JRQ6 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms