RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TP53TG1Q9Y2A0 90 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 VPS13DQ5THJ4 4388 aa4.56□□□□□ -1.68
NUP88-212ENST00000576708 KIR2DL5BA0A0G2JN68 375 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 KIR2DL5BA0A0G2JPC4 375 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 NUPR2A6NF83 97 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 C15orf62A8K5M9 175 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 GNG7O60262 68 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 HPGDSO60760 199 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 SNAPINO95295 136 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 IGKV1-5P01602 117 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 ELK1P19419 428 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 NANOS2P60321 138 aaKnown RBP4.55□□□□□ -1.68
NUP88-212ENST00000576708 PRCDQ00LT1 54 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 LEMD1Q68G75 181 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 TOMM20LQ6UXN7 152 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 TCF24Q7RTU0 167 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 CROCCP3Q8IVE0 287 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 KIR2DL5AQ8N109 375 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 OR4A16Q8NH70 328 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 KIR2DL5BQ8NHK3 375 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 PRSS3P2Q8NHM4 247 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 PHLDA1Q8WV24 401 aaPredicted RBP4.55□□□□□ -1.68
NUP88-212ENST00000576708 NXF2Q9GZY0 626 aaKnown RBP4.55□□□□□ -1.68
NUP88-212ENST00000576708 MFFQ9GZY8 342 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 FKBP11Q9NYL4 201 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 MRPL36Q9P0J6 103 aaKnown RBP4.55□□□□□ -1.68
NUP88-212ENST00000576708 HERC2O95714 4834 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
NUP88-212ENST00000576708 KMT2AQ03164 3969 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 A0A087WXM4 84 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 TRAV14DV4A0A0A6YYC5 116 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 A0A0B4J293 547 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 A0A0G2JRQ6 117 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 A0A1B0GU03 582 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 MPTX1A8MV57 137 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 DFFBO76075 338 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 PGAM2P15259 253 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 M6PRP20645 277 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 RCVRNP35243 200 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 ETV6P41212 452 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 DEFB131AP59861 70 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 HSPE1P61604 102 aaKnown RBP4.54□□□□□ -1.68
NUP88-212ENST00000576708 SP6Q3SY56 376 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 FAM122CQ6P4D5 195 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 OR11H2Q8NH07 326 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 OR10C1Q96KK4 312 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 TP53RKQ96S44 253 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 TSC22D3Q99576 134 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 RARRES2Q99969 163 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 FUNDC2Q9BWH2 189 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 NAA50Q9GZZ1 169 aaKnown RBP4.54□□□□□ -1.68
NUP88-212ENST00000576708 CSTL1Q9H114 145 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 AAMDCQ9H7C9 122 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 GPN1Q9HCN4 374 aaPredicted RBP4.54□□□□□ -1.68
NUP88-212ENST00000576708 KLK11Q9UBX7 282 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 FBXL17Q9UF56 701 aa4.54□□□□□ -1.68
NUP88-212ENST00000576708 KLK5Q9Y337 293 aaPredicted RBP4.54□□□□□ -1.68
NUP88-212ENST00000576708 SMIM31A0A1B0GVY4 71 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 GAGE10A6NGK3 116 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 FAM25AB3EWG3 89 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 FAM25CB3EWG5 89 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 FAM25GB3EWG6 89 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 ST8SIA3O43173 380 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 TMEM50AO95807 157 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 CA1P00915 261 aaPredicted RBP4.53□□□□□ -1.68
NUP88-212ENST00000576708 CD3DP04234 171 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 P0C879 139 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 RNASE2P10153 161 aaKnown RBP4.53□□□□□ -1.68
NUP88-212ENST00000576708 FHITP49789 147 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 PIGPP57054 158 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 ERHP84090 104 aaKnown RBP4.53□□□□□ -1.68
NUP88-212ENST00000576708 USF2Q15853 346 aaPredicted RBP4.53□□□□□ -1.68
NUP88-212ENST00000576708 SPANXN2Q5MJ10 180 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 MORN5Q5VZ52 161 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 LPCAT3Q6P1A2 487 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 SELENOHQ8IZQ5 122 aaKnown RBP4.53□□□□□ -1.68
NUP88-212ENST00000576708 ZNF114Q8NC26 417 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 OR4D10Q8NGI6 311 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 OR52I2Q8NH67 350 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 C11orf45Q8TAV5 145 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 C6orf62Q9GZU0 229 aaPredicted RBP4.53□□□□□ -1.68
NUP88-212ENST00000576708 MS4A6AQ9H2W1 248 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 FNDC4Q9H6D8 234 aaPredicted RBP4.53□□□□□ -1.68
NUP88-212ENST00000576708 VSIRQ9H7M9 311 aa4.53□□□□□ -1.68
NUP88-212ENST00000576708 DNAH6Q9C0G6 4158 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 C3orf85A0A1B0GTC6 90 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 KNCNA6PVL3 124 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 DNASE2O00115 360 aaPredicted RBP4.52□□□□□ -1.69
NUP88-212ENST00000576708 IFNA17P01571 189 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 GIG44P09565 113 aaPredicted RBP4.52□□□□□ -1.69
NUP88-212ENST00000576708 S100GP29377 79 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 SNCAP37840 140 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 NPBWR1P48145 328 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 AKR1C2P52895 323 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 CMC4P56277 68 aaPredicted RBP4.52□□□□□ -1.69
NUP88-212ENST00000576708 RND3P61587 244 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 PAFAH1B2P68402 229 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 RBMS2Q15434 407 aaKnown RBP4.52□□□□□ -1.69
NUP88-212ENST00000576708 TRIM16LQ309B1 348 aa4.52□□□□□ -1.69
NUP88-212ENST00000576708 TIGITQ495A1 244 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms