RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ADAT3Q96EY9 351 aaPredicted RBP0.22□□□□□ -2.37
CDC27-216ENST00000574304 C14orf132Q9NPU4 83 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 C14orf105Q9NVL8 296 aa0.22□□□□□ -2.37
CDC27-216ENST00000574304 MED1Q15648 1581 aaPredicted RBP0.21□□□□□ -2.38
CDC27-216ENST00000574304 hCG_1818297A0A087WSY0 165 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 IGHV1-58A0A0C4DH39 117 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 TCRBV4S1A1TA0A5B7 111 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 CLDN24A6NM45 220 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 A8MT66 165 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 CLDN22Q8N7P3 220 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 OR52L1Q8NGH7 329 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 SLC25A40Q8TBP6 338 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 FBXO5Q9UKT4 447 aa0.21□□□□□ -2.38
CDC27-216ENST00000574304 CHCHD2Q9Y6H1 151 aaPredicted RBP0.21□□□□□ -2.38
CDC27-216ENST00000574304 MYO18AQ92614 2054 aaKnown RBP0.21□□□□□ -2.38
CDC27-216ENST00000574304 ASH1LQ9NR48 2969 aaKnown RBP0.21□□□□□ -2.38
CDC27-216ENST00000574304 MAP3K5Q99683 1374 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 NAV2Q8IVL1 2488 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 M0R036 132 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 ZNF682O95780 498 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 DHFRP00374 187 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 SERPINE1P05121 402 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 CD2P06729 351 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 DYNLT1P63172 113 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 KRTAP26-1Q6PEX3 210 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 Q8IYB0 196 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 PLPP5Q8NEB5 264 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 SLC30A7Q8NEW0 376 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 OR11H6Q8NGC7 330 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 CT55Q8WUE5 264 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 ITFG2Q969R8 447 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 CMSS1Q9BQ75 279 aaKnown RBP0.2□□□□□ -2.38
CDC27-216ENST00000574304 PRADC1Q9BSG0 188 aa0.2□□□□□ -2.38
CDC27-216ENST00000574304 RNASE7Q9H1E1 156 aaKnown RBP0.2□□□□□ -2.38
CDC27-216ENST00000574304 hADV38S2A0JD32 116 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 M0R378 163 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 CYB5BO43169 146 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 NUPR1O60356 82 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 SERPINA6P08185 405 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 GDPD1Q8N9F7 314 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 C2orf50Q96LR7 162 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 PSTPIP2Q9H939 334 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 UQCC1Q9NVA1 299 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 ORMDL1Q9P0S3 153 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 TNFSF18Q9UNG2 199 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 NAV3Q8IVL0 2385 aa0.19□□□□□ -2.38
CDC27-216ENST00000574304 TIMM17BO60830 172 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 IGLV3-1P01715 115 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 EIF5AP63241 154 aaKnown RBP0.18□□□□□ -2.38
CDC27-216ENST00000574304 C12orf74Q32Q52 190 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 SPINK9Q5DT21 86 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 C12orf45Q8N5I9 185 aaPredicted RBP0.18□□□□□ -2.38
CDC27-216ENST00000574304 FAM172AQ8WUF8 416 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 CCDC42Q96M95 316 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 GPER1Q99527 375 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 UCK1Q9HA47 277 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 MYH7BA7E2Y1 1941 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 UNC13CQ8NB66 2214 aa0.18□□□□□ -2.38
CDC27-216ENST00000574304 NEO1Q92859 1461 aa0.17□□□□□ -2.38
CDC27-216ENST00000574304 A0A087WUJ7 227 aa0.17□□□□□ -2.38
CDC27-216ENST00000574304 A0A0D9SG42 100 aa0.17□□□□□ -2.38
CDC27-216ENST00000574304 LYPLA2O95372 231 aa0.17□□□□□ -2.38
CDC27-216ENST00000574304 PPIBP23284 216 aaKnown RBP0.17□□□□□ -2.38
CDC27-216ENST00000574304 SRIP30626 198 aa0.17□□□□□ -2.38
CDC27-216ENST00000574304 TRAPPC5Q8IUR0 188 aa0.17□□□□□ -2.38
CDC27-216ENST00000574304 BORCS7Q96B45 105 aa0.17□□□□□ -2.38
CDC27-216ENST00000574304 LINC00052Q96N35 136 aa0.17□□□□□ -2.38
CDC27-216ENST00000574304 PARD6GQ9BYG4 376 aaPredicted RBP0.17□□□□□ -2.38
CDC27-216ENST00000574304 RIMBP3CA6NJZ7 1639 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 RIMBP3BA6NNM3 1639 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 RIMBP3Q9UFD9 1639 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 CACNA1EQ15878 2313 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 OBSL1O75147 1896 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 SMIM9A6NGZ8 99 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 C8GP07360 202 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 SRP14P37108 136 aaKnown RBP0.16□□□□□ -2.38
CDC27-216ENST00000574304 OMPP47874 163 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 AP3S2P59780 193 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 CIRBPQ14011 172 aaKnown RBP0.16□□□□□ -2.38
CDC27-216ENST00000574304 IAH1Q2TAA2 248 aaPredicted RBP0.16□□□□□ -2.38
CDC27-216ENST00000574304 Q6Q795 121 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 OR6V1Q8N148 313 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 STAG3L4Q8TBR4 150 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 TP53RKQ96S44 253 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 TVP23BQ9NYZ1 205 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 IDI2-AS1Q9NZ38 188 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 PRELID3BQ9Y3B1 194 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 KMT2DO14686 5537 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 PLXNA4Q9HCM2 1894 aa0.16□□□□□ -2.38
CDC27-216ENST00000574304 ARHGEF28Q8N1W1 1705 aaKnown RBP0.16□□□□□ -2.38
CDC27-216ENST00000574304 RPS17P08708 135 aaKnown RBP0.15□□□□□ -2.39
CDC27-216ENST00000574304 KRTAP2-3P0C7H8 128 aa0.15□□□□□ -2.39
CDC27-216ENST00000574304 IMPG1Q17R60 797 aa0.15□□□□□ -2.39
CDC27-216ENST00000574304 HAGHLQ6PII5 290 aaPredicted RBP0.15□□□□□ -2.39
CDC27-216ENST00000574304 C2orf82Q6UX34 121 aa0.15□□□□□ -2.39
CDC27-216ENST00000574304 LINC00575Q6W349 94 aa0.15□□□□□ -2.39
CDC27-216ENST00000574304 KRTAP2-4Q9BYR9 128 aa0.15□□□□□ -2.39
CDC27-216ENST00000574304 KRTAP2-1Q9BYU5 128 aa0.15□□□□□ -2.39
CDC27-216ENST00000574304 MAST4O15021 2626 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms