RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
CCDC40-211ENST00000574099 TMEM127O75204 238 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 PSG1P11464 419 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 ID1P41134 155 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 PSMB3P49720 205 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 KRTAP10-2P60368 255 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 SPCS3P61009 180 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 SLC24A4Q8NFF2 622 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 RNASEH2CQ8TDP1 164 aaKnown RBP12.29□□□□□ -0.44
CCDC40-211ENST00000574099 KLK11Q9UBX7 282 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 RAB26Q9ULW5 256 aa12.29□□□□□ -0.44
CCDC40-211ENST00000574099 F5H768 121 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 SOCS3O14543 225 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 DEFB130BP0DP73 79 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 DEFB130AP0DP74 79 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 NEDD8Q15843 81 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 C2orf83Q53S99 150 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 RNASE12Q5GAN4 147 aaKnown RBP12.28□□□□□ -0.44
CCDC40-211ENST00000574099 EBLN2Q6P2I7 272 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 CROCCP3Q8IVE0 287 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 TMEM170AQ8WVE7 144 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 GPR146Q96CH1 333 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 RNF125Q96EQ8 232 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 ZNF486Q96H40 463 aaPredicted RBP12.28□□□□□ -0.44
CCDC40-211ENST00000574099 CLUHP3Q96NS8 147 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 LINC00588Q9Y4M8 146 aa12.28□□□□□ -0.44
CCDC40-211ENST00000574099 ZNF705GA8MUZ8 300 aaPredicted RBP12.27□□□□□ -0.45
CCDC40-211ENST00000574099 RPS19P39019 145 aaKnown RBP12.27□□□□□ -0.45
CCDC40-211ENST00000574099 CCL18P55774 89 aa12.27□□□□□ -0.45
CCDC40-211ENST00000574099 COPZ2Q9P299 210 aa12.27□□□□□ -0.45
CCDC40-211ENST00000574099 CEBPZOSA8MTT3 80 aa12.26□□□□□ -0.45
CCDC40-211ENST00000574099 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
CCDC40-211ENST00000574099 ALDH3B2P48448 385 aa12.26□□□□□ -0.45
CCDC40-211ENST00000574099 ETFRF1Q6IPR1 90 aa12.26□□□□□ -0.45
CCDC40-211ENST00000574099 A0A0J9YX75 114 aa12.25□□□□□ -0.45
CCDC40-211ENST00000574099 UCP1P25874 307 aa12.25□□□□□ -0.45
CCDC40-211ENST00000574099 NUP62P37198 522 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-211ENST00000574099 PAX9P55771 341 aa12.25□□□□□ -0.45
CCDC40-211ENST00000574099 LSM3P62310 102 aaKnown RBP12.25□□□□□ -0.45
CCDC40-211ENST00000574099 FCN2Q15485 313 aa12.25□□□□□ -0.45
CCDC40-211ENST00000574099 SPATA31B1PQ5VZV4 182 aa12.25□□□□□ -0.45
CCDC40-211ENST00000574099 LHFPL1Q86WI0 220 aa12.25□□□□□ -0.45
CCDC40-211ENST00000574099 KRTAP1-5Q9BYS1 174 aa12.25□□□□□ -0.45
CCDC40-211ENST00000574099 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-211ENST00000574099 CACNG5Q9UF02 275 aa12.25□□□□□ -0.45
CCDC40-211ENST00000574099 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 ELK1P19419 428 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 LYZP61626 148 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 CLINT1Q14677 625 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 RNASE10Q5GAN6 216 aaKnown RBP12.24□□□□□ -0.45
CCDC40-211ENST00000574099 SSX7Q7RTT5 188 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 CCDC71LQ8N9Z2 235 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 OR52E5Q8NH55 327 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 RNF141Q8WVD5 230 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 C20orf173Q96LM9 149 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 IGF2BP2-AS1Q96M15 143 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 COMMD3Q9UBI1 195 aa12.24□□□□□ -0.45
CCDC40-211ENST00000574099 DMBT1Q9UGM3 2413 aaPredicted RBP12.24□□□□□ -0.45
CCDC40-211ENST00000574099 SMIM31A0A1B0GVY4 71 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 ISLRO14498 428 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 OR5AC1P0C628 307 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 INAFM2P0DMQ5 153 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 SUPT4H1P63272 117 aaKnown RBP12.23□□□□□ -0.45
CCDC40-211ENST00000574099 DLK1P80370 383 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 AARDQ4LEZ3 155 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 OR8G2PQ6IF36 304 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 OR13C8Q8NGS7 320 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 LHFPL5Q8TAF8 219 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 PPP1R14BQ96C90 147 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 DOK5Q9P104 306 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 PFDN2Q9UHV9 154 aa12.23□□□□□ -0.45
CCDC40-211ENST00000574099 ZFP92A6NM28 416 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 M0R2Z0 102 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 ATP5G1P05496 136 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 ATP5G3P48201 142 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 ZNF90Q03938 601 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 MEF2DQ14814 521 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 SPINK13Q1W4C9 94 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 AMTNQ6UX39 209 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 FAM219AQ8IW50 185 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 OR4C16Q8NGL9 310 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 ABHD1Q96SE0 405 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 Q9H8V8 135 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 RPRMQ9NS64 109 aa12.22□□□□□ -0.45
CCDC40-211ENST00000574099 INSP01308 110 aa12.21□□□□□ -0.45
CCDC40-211ENST00000574099 CD3DP04234 171 aa12.21□□□□□ -0.45
CCDC40-211ENST00000574099 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.45
CCDC40-211ENST00000574099 OR8I2Q8N0Y5 310 aa12.21□□□□□ -0.45
CCDC40-211ENST00000574099 ARRDC1Q8N5I2 433 aa12.21□□□□□ -0.45
CCDC40-211ENST00000574099 OR4D10Q8NGI6 311 aa12.21□□□□□ -0.45
CCDC40-211ENST00000574099 C16orf92Q96LL3 132 aa12.21□□□□□ -0.45
CCDC40-211ENST00000574099 APOA1P02647 267 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 AZU1P20160 251 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 OR2F1Q13607 317 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 KLF9Q13886 244 aaPredicted RBP12.2□□□□□ -0.46
CCDC40-211ENST00000574099 NMSQ5H8A3 153 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 BAP18Q8IXM2 172 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 ZFAND1Q8TCF1 268 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 MARCH1Q8TCQ1 289 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 RBPMSQ93062 196 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms