RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 TMEM144Q7Z5S9 345 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 GTSCR1Q86UQ5 136 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 THAP8Q8NA92 274 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 OR2T35Q8NGX2 323 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 ZNF414Q96IQ9 312 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 METTL26Q96S19 204 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 TRGV9Q99603 122 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 NEURL2Q9BR09 285 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 GGACTQ9BVM4 153 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 ZFAND3Q9H8U3 227 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 OR5AC2Q9NZP5 309 aa8.33□□□□□ -1.08
CHD3-216ENST00000573936 STAB2Q8WWQ8 2551 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 CHEK1O14757 476 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 DEDDO75618 318 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 CFDP00746 253 aaPredicted RBP8.32□□□□□ -1.08
CHD3-216ENST00000573936 PET100P0DJ07 73 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 EDN2P20800 178 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 CAV2P51636 162 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 AKR1C1Q04828 323 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 GUCA2BQ16661 112 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 TCTE3Q8IZS6 198 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 OR51G1Q8NGK1 321 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 RNF126Q9BV68 326 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 RHPN1-AS1Q9BWJ2 59 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 NPVFQ9HCQ7 196 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 PFDN2Q9UHV9 154 aa8.32□□□□□ -1.08
CHD3-216ENST00000573936 SMCO3A2RU48 225 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 IZUMO1RA6ND01 250 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 ZNF785A8K8V0 405 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 E5RGE8 158 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 IL4P05112 153 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 HNRNPCP07910 306 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHD3-216ENST00000573936 PSG1P11464 419 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 LYL1P12980 280 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 CRYBB3P26998 211 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 NUP62P37198 522 aaPredicted RBP8.31□□□□□ -1.08
CHD3-216ENST00000573936 ACOT7LQ6ZUV0 252 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 GRAMD2BQ96HH9 432 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
CHD3-216ENST00000573936 SLC25A31Q9H0C2 315 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 VSIRQ9H7M9 311 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 LYRM2Q9NU23 88 aaPredicted RBP8.31□□□□□ -1.08
CHD3-216ENST00000573936 MBD2Q9UBB5 411 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 RABAC1Q9UI14 185 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 LSM4Q9Y4Z0 139 aaKnown RBP8.31□□□□□ -1.08
CHD3-216ENST00000573936 SMAD5-AS1Q9Y6J3 95 aa8.31□□□□□ -1.08
CHD3-216ENST00000573936 IGKV1D-37A0A075B6S9 117 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 FAM24AA6NFZ4 105 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 TSPAN4O14817 238 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 S100A7P31151 101 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 S100A11P31949 105 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 SULT1A1P50225 295 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 PAFAH1B2P68402 229 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 HBG1P69891 147 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 HBG2P69892 147 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 FGL1Q08830 312 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 ATP6V1FQ16864 119 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 STX12Q86Y82 276 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 TMEM61Q8N0U2 210 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 BPIFCQ8NFQ6 507 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 THAP6Q8TBB0 222 aa8.3□□□□□ -1.08
CHD3-216ENST00000573936 FXYD6-FXYD2A0A087WZ82 144 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 IGSF23A1L1A6 192 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 PFDN1O60925 122 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 P2RY1P47900 373 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 EIF2B2P49770 351 aaKnown RBP8.29□□□□□ -1.08
CHD3-216ENST00000573936 CMC4P56277 68 aaPredicted RBP8.29□□□□□ -1.08
CHD3-216ENST00000573936 SELENOTP62341 195 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 ZNF90Q03938 601 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 SLC38A11Q08AI6 406 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 TEPPQ6URK8 271 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 LILRB2Q8N423 598 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 TMEM252Q8N6L7 170 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 OR11H4Q8NGC9 324 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 ST8SIA2Q92186 375 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 RNF125Q96EQ8 232 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 RNF2Q99496 336 aa8.29□□□□□ -1.08
CHD3-216ENST00000573936 DNAH7Q8WXX0 4024 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 IGKV1OR2-108A0A075B7D4 117 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 IGHV3-49A0A0A0MS15 119 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 OR4C46A6NHA9 309 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 CST7O76096 145 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 C1QBP02746 253 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 APOHP02749 345 aaPredicted RBP8.28□□□□□ -1.08
CHD3-216ENST00000573936 AP2S1P53680 142 aaPredicted RBP8.28□□□□□ -1.08
CHD3-216ENST00000573936 CD81P60033 236 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 LYZP61626 148 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 BAXQ07812 192 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 ARL16Q0P5N6 197 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 OR2F1Q13607 317 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 RAB31Q13636 194 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 USF2Q15853 346 aaPredicted RBP8.28□□□□□ -1.08
CHD3-216ENST00000573936 FAM90A2PQ658T7 463 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 CYP2G1PQ6ZSU1 146 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 TCF24Q7RTU0 167 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 S100A7AQ86SG5 101 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 Q8N1Y9 231 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 PBDC1Q9BVG4 233 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 SLC45A2Q9UMX9 530 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms