RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 LINC01560Q8TB33 94 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 NUDT11Q96G61 164 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 SNHG12Q9BXW3 62 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 FBXL7Q9UJT9 491 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 RALYQ9UKM9 306 aaKnown RBP8.98□□□□□ -0.97
RPAIN-212ENST00000573126 TBL2Q9Y4P3 447 aaKnown RBP8.98□□□□□ -0.97
RPAIN-212ENST00000573126 HLA-DQA1P01909 254 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 SLC25A5P05141 298 aaKnown RBP8.98□□□□□ -0.97
RPAIN-212ENST00000573126 GPX1P07203 203 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 ZNF841Q6ZN19 808 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 ATG101Q9BSB4 218 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 ZNF331Q9NQX6 463 aaPredicted RBP8.98□□□□□ -0.97
RPAIN-212ENST00000573126 SIGLEC9Q9Y336 463 aa8.98□□□□□ -0.97
RPAIN-212ENST00000573126 ASH1LQ9NR48 2969 aaKnown RBP8.98□□□□□ -0.97
RPAIN-212ENST00000573126 IGHV1-3A0A0C4DH29 117 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 IZUMO1RA6ND01 250 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 PGPA6NDG6 321 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 CORTO00230 105 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 IGLV1-47P01700 117 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 GRNP28799 593 aaKnown RBP8.97□□□□□ -0.97
RPAIN-212ENST00000573126 UBE2G1P62253 170 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 FOXC1Q12948 553 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 TBR1Q16650 682 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
RPAIN-212ENST00000573126 TEX45Q8NA69 505 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 PERPQ96FX8 193 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 TMEM68Q96MH6 324 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 IGF2RP11717 2491 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 APCSP02743 223 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 CRYGCP07315 174 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 CD3EP07766 207 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 ETFRF1Q6IPR1 90 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 PPP1R27Q86WC6 154 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 NUP35Q8NFH5 326 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 C22orf15Q8WYQ4 148 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 FBXL15Q9H469 300 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 EPDR1Q9UM22 224 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 ATRXP46100 2492 aa8.97□□□□□ -0.97
RPAIN-212ENST00000573126 A0A1W2PS18 150 aa8.96□□□□□ -0.97
RPAIN-212ENST00000573126 NBEAP1P0C6P0 100 aa8.96□□□□□ -0.97
RPAIN-212ENST00000573126 MYCNOSP40205 109 aa8.96□□□□□ -0.97
RPAIN-212ENST00000573126 COMPP49747 757 aaPredicted RBP8.96□□□□□ -0.97
RPAIN-212ENST00000573126 OR10J3Q5JRS4 329 aa8.96□□□□□ -0.97
RPAIN-212ENST00000573126 ZNF705AQ6ZN79 300 aaPredicted RBP8.96□□□□□ -0.97
RPAIN-212ENST00000573126 TEX43Q6ZNM6 134 aa8.96□□□□□ -0.97
RPAIN-212ENST00000573126 SSX8Q7RTT4 187 aa8.96□□□□□ -0.97
RPAIN-212ENST00000573126 TMEM116Q8NCL8 245 aa8.96□□□□□ -0.97
RPAIN-212ENST00000573126 KCNS1Q96KK3 526 aa8.96□□□□□ -0.97
RPAIN-212ENST00000573126 SSBP4Q9BWG4 385 aaPredicted RBP8.96□□□□□ -0.97
RPAIN-212ENST00000573126 FAM90A27PA6NNH2 459 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 HIGD1CA8MV81 97 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 B9A039 149 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 BUB1B-PAK6H3BSN5 160 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 LY6HO94772 140 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 CAMPP49913 170 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 GDF5OSQ5U4N7 250 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 IGFBPL1Q8WX77 278 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 RPEQ96AT9 228 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 MBD6Q96DN6 1003 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 NEU1Q99519 415 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 CLEC7AQ9BXN2 247 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 NRN1Q9NPD7 142 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 ZNF586Q9NXT0 402 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 HYPMO75409 117 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 TOX4O94842 621 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 CRYGBP07316 175 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 PRRX1P54821 245 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 TMEM183BQ1AE95 376 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 MUC15Q8N387 334 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 TRGV9Q99603 122 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 VAMP8Q9BV40 100 aa8.96□□□□□ -0.98
RPAIN-212ENST00000573126 PPIAL4CA0A0B4J2A2 164 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 PPIAL4GP0DN37 164 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 PRB4P10163 310 aaPredicted RBP8.95□□□□□ -0.98
RPAIN-212ENST00000573126 NTF3P20783 257 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 NBL1P41271 181 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 GPR6P46095 362 aaPredicted RBP8.95□□□□□ -0.98
RPAIN-212ENST00000573126 CASP6P55212 293 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 LYZP61626 148 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 PLGLAQ15195 96 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 COX19Q49B96 90 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 LINC00322Q6ZN03 302 aaPredicted RBP8.95□□□□□ -0.98
RPAIN-212ENST00000573126 FAM231DQ6ZW35 169 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 STXBP6Q8NFX7 210 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 C7orf69Q9H7B7 122 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 VWC2LB2RUY7 222 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 ZNF324O75467 553 aaPredicted RBP8.95□□□□□ -0.98
RPAIN-212ENST00000573126 GP9P14770 177 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 SRSF12Q8WXF0 261 aaKnown RBP8.95□□□□□ -0.98
RPAIN-212ENST00000573126 TNFRSF14Q92956 283 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 GRAMD2BQ96HH9 432 aa8.95□□□□□ -0.98
RPAIN-212ENST00000573126 F11RQ9Y624 299 aaKnown RBP8.95□□□□□ -0.98
RPAIN-212ENST00000573126 ARHGAP32A7KAX9 2087 aa8.94□□□□□ -0.98
RPAIN-212ENST00000573126 DIRC3C9JPN6 131 aa8.94□□□□□ -0.98
RPAIN-212ENST00000573126 SIAH2O43255 324 aa8.94□□□□□ -0.98
RPAIN-212ENST00000573126 HIST1H1EP10412 219 aaKnown RBP8.94□□□□□ -0.98
RPAIN-212ENST00000573126 PSG1P11464 419 aa8.94□□□□□ -0.98
RPAIN-212ENST00000573126 RBPJQ06330 500 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms