RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 METTL26Q96S19 204 aa11.87□□□□□ -0.51
CHD3-215ENST00000572750 MGAT4CQ9UBM8 478 aa11.87□□□□□ -0.51
CHD3-215ENST00000572750 SMAD5-AS1Q9Y6J3 95 aa11.87□□□□□ -0.51
CHD3-215ENST00000572750 CD7P09564 240 aa11.86□□□□□ -0.51
CHD3-215ENST00000572750 RD3LP0DJH9 198 aa11.86□□□□□ -0.51
CHD3-215ENST00000572750 BCAP31P51572 246 aa11.86□□□□□ -0.51
CHD3-215ENST00000572750 RGS21Q2M5E4 152 aa11.86□□□□□ -0.51
CHD3-215ENST00000572750 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
CHD3-215ENST00000572750 WFDC10AQ9H1F0 79 aa11.86□□□□□ -0.51
CHD3-215ENST00000572750 LYSTQ99698 3801 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 PVALBP20472 110 aaPredicted RBP11.85□□□□□ -0.51
CHD3-215ENST00000572750 CRYBB3P26998 211 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 OR2F1Q13607 317 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 LILRB2Q8N423 598 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 OR51G1Q8NGK1 321 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 RNF125Q96EQ8 232 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 TRGV9Q99603 122 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 NEURL2Q9BR09 285 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 PBDC1Q9BVG4 233 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 NMES1Q9C002 83 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 VSIRQ9H7M9 311 aa11.85□□□□□ -0.51
CHD3-215ENST00000572750 IGKV3-7A0A075B6H7 116 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 TRAV25A0A0B4J276 109 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 FAM24AA6NFZ4 105 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 TSPAN4O14817 238 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 DEDDO75618 318 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 NPPCP23582 126 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 BMI1P35226 326 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 DLK1P80370 383 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 LAMTOR1Q6IAA8 161 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 OR10P1Q8NGE3 313 aa11.84□□□□□ -0.51
CHD3-215ENST00000572750 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
CHD3-215ENST00000572750 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
CHD3-215ENST00000572750 IGSF23A1L1A6 192 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 CST7O76096 145 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 HNRNPCP07910 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHD3-215ENST00000572750 FRMD6-AS1P0C7T7 363 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 LYZP61626 148 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 TCF24Q7RTU0 167 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 TMEM217Q8N7C4 229 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 B9D2Q9BPU9 175 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 TMEM231Q9H6L2 316 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 OR5AC2Q9NZP5 309 aa11.83□□□□□ -0.52
CHD3-215ENST00000572750 CSMD3Q7Z407 3707 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 DFFBO76075 338 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 FABP1P07148 127 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
CHD3-215ENST00000572750 P2RY1P47900 373 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 TFPI2P48307 235 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 SLC38A11Q08AI6 406 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 FAM90A2PQ658T7 463 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 TMEM144Q7Z5S9 345 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 GBGT1Q8N5D6 347 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 PPP1R1CQ8WVI7 109 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 NARS2Q96I59 477 aaKnown RBP11.82□□□□□ -0.52
CHD3-215ENST00000572750 RABAC1Q9UI14 185 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 DNAH7Q8WXX0 4024 aa11.82□□□□□ -0.52
CHD3-215ENST00000572750 H0YIZ8 118 aa11.81□□□□□ -0.52
CHD3-215ENST00000572750 CXCL3P19876 107 aa11.81□□□□□ -0.52
CHD3-215ENST00000572750 RPL11P62913 178 aaKnown RBP11.81□□□□□ -0.52
CHD3-215ENST00000572750 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
CHD3-215ENST00000572750 OXA1LQ15070 435 aa11.81□□□□□ -0.52
CHD3-215ENST00000572750 TMEM182Q6ZP80 229 aaPredicted RBP11.81□□□□□ -0.52
CHD3-215ENST00000572750 STX12Q86Y82 276 aa11.81□□□□□ -0.52
CHD3-215ENST00000572750 DEFB125Q8N687 156 aa11.81□□□□□ -0.52
CHD3-215ENST00000572750 ASCL2Q99929 193 aa11.81□□□□□ -0.52
CHD3-215ENST00000572750 UBQLN2Q9UHD9 624 aa11.81□□□□□ -0.52
CHD3-215ENST00000572750 U3KQE9 123 aa11.81□□□□□ -0.52
CHD3-215ENST00000572750 A0A1W2PS18 150 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 OR4C46A6NHA9 309 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 OR11H12B2RN74 326 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 FNDC10F2Z333 226 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 EIF2B2P49770 351 aaKnown RBP11.8□□□□□ -0.52
CHD3-215ENST00000572750 SULT1A1P50225 295 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 FCN2Q15485 313 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 CYP2G1PQ6ZSU1 146 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 TMEM252Q8N6L7 170 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 OR11H7Q8NGC8 314 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 GRAMD2BQ96HH9 432 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 GGACTQ9BVM4 153 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 MED28Q9H204 178 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 C19orf73Q9NVV2 129 aa11.8□□□□□ -0.52
CHD3-215ENST00000572750 UBE2L5PA0A1B0GUS4 154 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 E5RGE8 158 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 ODF3L2Q3SX64 289 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 BPIFCQ8NFQ6 507 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 WWC2-AS2Q96NR7 200 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 MS4A6AQ9H2W1 248 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 TUBA4BQ9H853 241 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 SRD5A3Q9H8P0 318 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 NPVFQ9HCQ7 196 aa11.79□□□□□ -0.52
CHD3-215ENST00000572750 HUWE1Q7Z6Z7 4374 aaKnown RBP11.79□□□□□ -0.52
CHD3-215ENST00000572750 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
CHD3-215ENST00000572750 MPC2O95563 127 aa11.78□□□□□ -0.52
CHD3-215ENST00000572750 RLN2P04090 185 aa11.78□□□□□ -0.52
CHD3-215ENST00000572750 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHD3-215ENST00000572750 TEPPQ6URK8 271 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms